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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 49total RNA-seq
  • 8single cell RNA-seq
  • 3ATAC-seq
Assay category
  • 57Transcription
  • 3DNA accessibility
Date released
  • 57August, 2021
  • 3February, 2023
Available data
  • 216bigWig
  • 186bam
  • 170bed narrowPeak
  • 170fastq
  • 153zippedFastqFolder
  • 114tsv
  • 84tagAlign
  • 64xls
  • 60txt
  • 7hic
  • 5bedpe bed3+
  • 3bed bedgraph
  • 3cool
  • 2bed bed3+
  • 1bed broadPeak
  • 1bedpe
  • 1vcf
Organism
  • 60Homo sapiens
Biosample type
  • 57tissue
  • 3in vitro differentiated cells
Organ
  • 57kidney
Project
  • 60AMP
Genome assembly (visualization)
  • 3hg19
Lab
  • 57Katalin Susztak, Upenn
  • 3Struan F.A. Grant, CHOP
Audit category:
  • 1inconsistent ontology term
award.rfa!
  • AMP
BIOSAMPLE
ASSAY

60 results

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total RNA-seq
single cell RNA-seq
ATAC-seq
tissue
kidney498
in vitro differentiated cells
Progenitor cell of Hypothalamus (neural progenitor cell)1
embryonic stem cell1
neuron cell of Hypothalamus (neuron)1
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