Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
81
total RNA-seq
14
ATAC-seq
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
2
snATAC-seq
Assay category
81
Transcription
16
DNA accessibility
Date released
168
August, 2021
153
May, 2021
134
May, 2022
102
February, 2023
59
September, 2020
47
September, 2023
45
February, 2021
45
May, 2020
19
April, 2020
16
January, 2021
14
May, 2023
7
August, 2020
7
March, 2020
5
March, 2023
3
October, 2022
2
March, 2019
1
October, 2017
Available data
76
fastq
3
bed bedgraph
3
bigWig
3
txt
2
bed narrowPeak
Organism
102
Homo sapiens
Biosample type
76
primary cell
18
tissue
5
cell line
3
in vitro differentiated cells
Organ
55
pancreas
37
epithelium
Project
76
HPAP
23
T1D
3
AMP
Genome assembly (visualization)
3
hg19
Lab
76
Klaus Kaestner, Upenn
23
Kyle Gaulton, UCSD
3
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent ontology term
award.rfa!
AMP
BIOSAMPLE
ASSAY
102 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ATAC-seq
CRISPR genome editing followed by DNA sequencing
HiChIP
snATAC-seq
primary cell
exocrine cell
39
pancreatic alpha cell
27
pancreatic beta cell
10
tissue
islet of Langerhans
5
11
2
cell line
EndoC_BH1
3
2
in vitro differentiated cells
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
Download