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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 211total RNA-seq
  • 152single cell RNA-seq
  • 5STARR-seq
Assay category
  • 363Transcription
Date released
  • 81February, 2023
  • 72August, 2021
  • 56September, 2020
  • 51May, 2021
  • 47September, 2023
  • 33May, 2022
  • 12February, 2021
  • 9April, 2020
  • 4March, 2020
  • 3May, 2023
Available data
  • 126fastq
  • 63tsv
  • 57txt
  • 53bam
  • 53bigWig
  • 52zippedFastqFolder
Organism
  • 368Homo sapiens
Biosample type
  • 228primary cell
  • 124tissue
  • 16cell line
Organ
  • 109kidney
  • 63pancreas
  • 55epithelium
  • 11liver
  • 9lung
Project
  • 177HPAP
  • 75AMP
  • 60T1D
  • 47KPMP
  • 9LungMap
Genome assembly (visualization)
  • 53GRCh38
  • 53hg19
Lab
  • 177Klaus Kaestner, Upenn
  • 60Katalin Susztak, Upenn
  • 56Kyle Gaulton, UCSD
  • 47KPMP
  • 15Bing Ren, UCSD
  • 9Xin Sun, UCSD
  • 4AMP-T2D consortium
Audit category:
  • 3inconsistent ontology term
award.rfa!
  • AMP
BIOSAMPLE
ASSAY

368 results

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Clear Filters
total RNA-seq
single cell RNA-seq
STARR-seq
primary cell
Langerhans cell85
monocyte51
pancreatic alpha cell42
exocrine cell39
pancreatic beta cell11
tissue
kidney4958
lung9
islet of Langerhans8
cell line
HepG292
EndoC_BH12
HEK293T2
Synthesized DNA1
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