Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
360
ChIP-seq
5
total RNA-seq
1
Hi-C
1
WGBS
1
pCHi-C
Assay category
360
DNA binding
5
Transcription
1
3D chromatin structure
1
DNA methylation
Target of assay
286
transcription factor
82
recombinant protein
56
control
53
RNA binding protein
20
chromatin remodeller
15
histone
15
histone modification
8
broad histone mark
7
narrow histone mark
2
other context
2
other post-translational modification
Date released
315
November, 2017
46
November, 2018
5
January, 2019
February, 2021
1
December, 2018
1
May, 2020
Available data
367
fastq
365
bam
318
bigWig
293
bed narrowPeak
293
bigBed narrowPeak
58
bed broadPeak
58
bigBed broadPeak
12
tagAlign
6
tsv
3
tar
1
bed bedMethyl
1
bigBed bedMethyl
Organism
368
Homo sapiens
Biosample type
368
cell line
Organ
368
liver
Project
368
AMP
Genome assembly (visualization)
313
hg19
267
GRCh38
Lab
368
AMP-T2D consortium
Audit category:
13
missing controlled_by
Audit category:
26
inconsistent control read length
8
inconsistent control run_type
award.rfa!
AMP2
month_released!
February, 2021
October, 2019
BIOSAMPLE
ASSAY
368 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
Hi-C
WGBS
pCHi-C
cell line
HepG2
360
5
1
1
1
Download