Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 503accessible chromatin
  • 4variant allelic effects
  • 3target gene predictions
  • 2chromatin state
Date released
  • 222November, 2021
  • 65January, 2020
  • 53May, 2020
  • 28January, 2021
  • 24February, 2024
  • 19April, 2020
  • 19February, 2023
  • 14February, 2021
  • 13May, 2021
  • 12November, 2019
  • 11November, 2022
  • 9October, 2019
  • 7May, 2022
  • 4January, 2022
  • 4September, 2022
  • 3September, 2018
  • 2May, 2019
  • 2November, 2020
  • 1June, 2021
Available data
  • 5977bed bed3+
  • 3535tsv
  • 869bed bed9
  • 512bigWig
  • 83txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 468Homo sapiens
Collection Tags
  • 259T2DKP
  • 228AMP
  • 41T1D
  • 31CMDGA
  • 26DGA
  • 22 T2DKP
  • 13BLUEPRINT
  • 12HPAP
  • 7T2D
Biosample type
  • 383primary cell
  • 113tissue
  • 12in vitro differentiated cells
  • 4cell line
Organ
  • 154epithelium
  • 57pancreas
  • 55connective tissue
  • 36eye
  • 27vasculature
  • 22heart
  • 21brain
  • 21kidney
  • 19blood vessel
  • 16musculature of body
  • 14limb
  • 11intestine
  • 10bone element
  • 9artery
  • 9liver
  • 9lung
  • 8skeleton
  • 6adrenal gland
  • 5adipose tissue
  • 5skin of body
  • 5stomach
  • 3extraembryonic component
  • 3large intestine
  • 3lymphatic vessel
  • 3mammary gland
  • 3ureter
  • 2bone marrow
  • 2bronchus
  • 2embryo
  • 2esophagus
  • 2nerve
  • 2placenta
  • 2small intestine
  • 1gonad
  • 1ovary
  • 1spleen
  • 1thymus
  • 1thyroid gland
  • 1uterus
  • 1vein
Project
  • 243AMP
  • 222ENCODE
  • 28T1D
  • 19LungMap
Genome assembly (visualization)
  • 512hg19
  • 361GRCh38
award.rfa!
  • AMP2
BIOSAMPLE
TYPE

512 results

search-icontable-tab-icon
Clear Filters
accessible chromatin
variant allelic effects
target gene predictions
chromatin state
primary cell
monocyte16
fibroblast14
endothelial cell12
excitatory neuron12
macrophage11
tissue
retina16
pigmented layer of retina13
coronary artery31
islet of Langerhans4
heart3
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)2
SGBS preadipocytes2
retinal pigment epithelial cell2
adipocyte1
cardiac muscle cell1
cell line
EndoC_BH11
HepG21
glomerular visceral epithelial cell1
smooth muscle cell of the coronary artery1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego