Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 146candidate regulatory elements
  • 80target gene predictions
  • 74chromatin state
  • 22accessible chromatin
  • 7Fine-mapped variants
  • 7binding sites
  • 7eQTL
  • 7gene expression
  • 7histone modifications
  • 7variant allelic effects
  • 2differential activity
Date released
  • 204September, 2022
  • 92February, 2021
  • 11November, 2021
  • 9March, 2020
  • 6February, 2020
  • 6June, 2020
  • 6May, 2021
  • 5January, 2020
  • 5March, 2025
  • 5May, 2020
  • 3August, 2017
  • 3February, 2024
  • 3May, 2022
  • 2March, 2024
  • 2May, 2019
  • 1August, 2021
  • 1January, 2022
  • 1October, 2019
  • 1October, 2022
Available data
  • 275bed bed3+
  • 71bed bed9
  • 19tsv
  • 16bigWig
  • 3bigBed bed9
Organism
  • 366Homo sapiens
Collection Tags
  • 204EpiMap
  • 79ENCODE
  • 19ChIP-Atlas
  • 18DGA
  • 18T2DKP
  • 17 T2DKP
  • 13AMP
  • 12GTEx
  • 6STARNET
  • 4T2D
  • 1T1D
  • 1eQTLCatalogue
Biosample type
  • 311tissue
  • 36primary cell
  • 17cell line
  • 2in vitro differentiated cells
Organ
  • 2896vasculature
  • 2859bodily fluid
  • 2848blood
  • 2834blood vessel
  • 2658vein
  • 900epithelium
  • 617kidney
  • 464brain
  • 461connective tissue
  • 366musculature of body
  • 311lung
  • 289intestine
  • 277pancreas
  • 255heart
  • 244limb
  • 215embryo
  • 204skin of body
  • 174large intestine
  • 146extraembryonic component
  • 137liver
  • 119stomach
  • 109eye
  • 99adipose tissue
  • 89bone element
  • 87mammary gland
  • 84small intestine
  • 83uterus
  • 79artery
  • 78prostate gland
  • 73adrenal gland
  • 73placenta
  • 64penis
  • 64ureter
  • 62lymph node
  • 50gonad
  • 49thymus
  • 45esophagus
  • 43spinal cord
  • 34spleen
  • 26testis
  • 25nerve
  • 24lymphoid tissue
  • 23ovary
  • 23thyroid gland
  • 21lymphatic vessel
  • 19mouth
  • 18skeleton
  • 16bronchus
  • 13bone marrow
  • 13breast
  • 13pituitary gland
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 355AMP
  • 11ENCODE
Genome assembly (visualization)
  • 353hg19
  • 96GRCh38
award.rfa!
  • AMP2
BIOSAMPLE
TYPE

366 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
Fine-mapped variants
binding sites
eQTL
gene expression
histone modifications
variant allelic effects
differential activity
tissue
muscle of arm33161611
muscle of leg2714152
muscle of back281313
psoas muscle7841
gastrocnemius medialis8541
primary cell
skeletal muscle satellite cell22241
skeletal muscle cell21111
skeletal muscle fiber32
myotube21
type I muscle cell12
cell line
LHCN-M2211111
A673221
SJCRH302111
in vitro differentiated cells
myotube11
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego