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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 1400total RNA-seq
  • 355single cell RNA-seq
  • 86RNA microarray
  • 18small RNA-seq
  • 10MeRIP-seq
  • 3snDrop-seq
Assay category
  • 1773Transcription
Target of assay
  • 5control
  • 5nucleotide modification
Date released
  • 649February, 2021
  • 182May, 2021
  • 168July, 2018
  • 145May, 2020
  • 113August, 2021
  • 94February, 2023
  • 89August, 2017
  • 60May, 2022
  • 56September, 2020
  • 49April, 2018
  • 49July, 2019
  • 47September, 2023
  • 27September, 2018
  • 26October, 2019
  • 25February, 2020
  • 20November, 2019
  • 15February, 2018
  • 15March, 2020
  • 14November, 2020
  • 10December, 2019
  • 9April, 2020
  • 3August, 2018
  • 3June, 2018
  • 2October, 2018
  • 1May, 2023
  • 1November, 2018
Available data
  • 1468tsv
  • 1335bam
  • 1331bigWig
  • 366fastq
  • 99txt
  • 52zippedFastqFolder
  • 8csv
  • 2bed bed3+
Organism
  • 1872Homo sapiens
Biosample type
  • 1255tissue
  • 374primary cell
  • 138in vitro differentiated cells
  • 105cell line
Organ
  • 488pancreas
  • 475connective tissue
  • 400adipose tissue
  • 203epithelium
  • 179liver
  • 162heart
  • 146bone element
  • 66kidney
  • 65blood vessel
  • 65vasculature
  • 56artery
  • 21brain
  • 19eye
  • 14embryo
  • 9lung
  • 8musculature of body
  • 4skeleton
  • 3limb
  • 1nerve
  • 1spinal cord
Project
  • 1579AMP
  • 177HPAP
  • 60T1D
  • 47KPMP
  • 9LungMap
Genome assembly (visualization)
  • 1332hg19
  • 1330GRCh38
Lab
  • 1539AMP-T2D consortium
  • 177Klaus Kaestner, Upenn
  • 70Kyle Gaulton, UCSD
  • 47KPMP
  • 20Karen Mohlke, UNC
  • 10Rohit N. Kulkarni, M.D., Ph.D.
  • 9Xin Sun, UCSD
Audit category:
  • 225inconsistent ontology term
  • 9audit script error
award.rfa!
  • AMP2
BIOSAMPLE
ASSAY

1872 results

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Clear Filters
total RNA-seq
single cell RNA-seq
RNA microarray
small RNA-seq
MeRIP-seq
snDrop-seq
tissue
adipose tissue382
islet of Langerhans29164
liver16711
bone element84
bone tissue58
primary cell
Langerhans cell85
pancreatic alpha cell5212
monocyte52
exocrine cell39
pancreatic beta cell2112
in vitro differentiated cells
cardiomyocytes59
cardiac precursors (cardiac muscle cell)19
induced pluripotent stem cell9
embryonic stem cell7
neural progenitor cell7
cell line
smooth muscle cell of the coronary artery52
EndoC_BH1336
H1-hESC8
early embryonic cell2
RCC 7860 HIF1a re-expression1
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