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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 3013target gene predictions
  • 2638pQTL
  • 1671candidate regulatory elements
  • 1186accessible chromatin
  • 977histone modifications
  • 944chromatin state
  • 811binding sites
  • 632gene expression
  • 484differential activity
  • 165eQTL
  • 74Fine-mapped variants
  • 8caQTL
  • 7sQTL
  • 5hQTL
  • 5variant allelic effects
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 2582February, 2021
  • 2511September, 2022
  • 1984July, 2026
  • 389May, 2021
  • 333November, 2021
  • 320May, 2026
  • 289June, 2020
  • 281September, 2023
  • 264February, 2024
  • 128March, 2020
  • 106January, 2022
  • 96October, 2022
  • 89January, 2020
  • 82August, 2021
  • 76May, 2020
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 43May, 2022
  • 41November, 2022
  • 35August, 2017
  • 32February, 2023
  • 30March, 2024
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 4March, 2026
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 2May, 2024
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 7841bed bed3+
  • 3489tsv
  • 869bed bed9
  • 508bigWig
  • 87txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 12bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 12583Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1848ChIP-Atlas
  • 1458ENCODE-rE2G
  • 958ENCODE
  • 513AMP
  • 421T1D
  • 402T2DKP
  • 399DGA
  • 393HDMA
  • 320pyxis
  • 281KPMP
  • 219BLUEPRINT
  • 1744DN
  • 151GTEx
  • 133CATlas
  • 131 T2DKP
  • 111T2D
  • 101eQTLCatalogue
  • 97CMDGA
  • 67HPAP
  • 12ROADMAP
Biosample type
  • 5888tissue
  • 3680primary cell
  • 2557cell line
  • 501in vitro differentiated cells
  • 3stem cell
Organ
  • 3365blood
  • 2873vasculature
  • 2853bodily fluid
  • 2838blood vessel
  • 2658vein
  • 883brain
  • 859epithelium
  • 705kidney
  • 489connective tissue
  • 452heart
  • 439lung
  • 355intestine
  • 353musculature of body
  • 308pancreas
  • 295skin of body
  • 236limb
  • 226large intestine
  • 215embryo
  • 200liver
  • 174extraembryonic component
  • 159eye
  • 139adipose tissue
  • 138stomach
  • 111muscle organ
  • 106bone element
  • 103mammary gland
  • 101adrenal gland
  • 97placenta
  • 97small intestine
  • 93thymus
  • 93uterus
  • 86prostate gland
  • 84artery
  • 70ureter
  • 64gonad
  • 64penis
  • 63spleen
  • 62lymph node
  • 60__MARKER__
  • 49spinal cord
  • 46esophagus
  • 46thyroid gland
  • 32ovary
  • 31testis
  • 24lymphoid tissue
  • 24skeleton
  • 23nerve
  • 21lymphatic vessel
  • 21mouth
  • 15breast
  • 15bronchus
  • 13bone marrow
  • 13pituitary gland
  • 13urinary bladder
  • 12tongue
  • 12vagina
  • 5trachea
  • 4nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 11916AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 17community
  • 5ITG
Genome assembly (visualization)
  • 6763hg19
  • 3818GRCh38
  • 4hg18
award.rfa!
  • AMP2
software_used.software.name!
  • deltasvm
BIOSAMPLE
TYPE

12631 results

search-icontable-tab-icon
Clear Filters
target gene predictions
pQTL
candidate regulatory elements
accessible chromatin
histone modifications
chromatin state
binding sites
gene expression
differential activity
eQTL
Fine-mapped variants
caQTL
sQTL
hQTL
variant allelic effects
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart38375121141
stomach4240311911
brain30292318112
head of caudate nucleus86
primary cell
monocyte2188611544121
fibroblast28381102
CD8-positive, alpha-beta T cell27743012
endothelial cell1720125251
T-cell644
cell line
A549332111182
HeLa-S359531
H1-hESC39111128
K5623071172
MCF-71391253
in vitro differentiated cells
hematopoietic multipotent progenitor cell2219111011
neural progenitor cell65101547
adipocyte7441611
embryonic stem cell15151
mesenchymal stem cell431121
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
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