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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 3013target gene predictions
  • 2638pQTL
  • 1186accessible chromatin
  • 977histone modifications
  • 944chromatin state
  • 833candidate regulatory elements
  • 811binding sites
  • 632gene expression
  • 484differential activity
  • 165eQTL
  • 141variant allelic effects
  • 74Fine-mapped variants
  • 8caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 2511September, 2022
  • 1984July, 2026
  • 1746February, 2021
  • 389May, 2021
  • 333November, 2021
  • 320May, 2026
  • 319February, 2024
  • 289June, 2020
  • 281September, 2023
  • 155May, 2020
  • 128March, 2020
  • 106January, 2022
  • 96October, 2022
  • 89January, 2020
  • 82August, 2021
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 43May, 2022
  • 41November, 2022
  • 35August, 2017
  • 32February, 2023
  • 30March, 2024
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 4March, 2026
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 2May, 2024
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 7123bed bed3+
  • 3489tsv
  • 869bed bed9
  • 512bigWig
  • 87txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 11881Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1848ChIP-Atlas
  • 1458ENCODE-rE2G
  • 529DGA
  • 513AMP
  • 421T1D
  • 406T2DKP
  • 393HDMA
  • 320pyxis
  • 281KPMP
  • 219BLUEPRINT
  • 1744DN
  • 151GTEx
  • 141 T2DKP
  • 133CATlas
  • 122ENCODE
  • 111T2D
  • 101eQTLCatalogue
  • 97CMDGA
  • 67HPAP
  • 12ROADMAP
Biosample type
  • 5458tissue
  • 3592primary cell
  • 2411cell line
  • 463in vitro differentiated cells
  • 3stem cell
Organ
  • 3345blood
  • 2862vasculature
  • 2831bodily fluid
  • 2827blood vessel
  • 2655vein
  • 849brain
  • 848epithelium
  • 637kidney
  • 465connective tissue
  • 428heart
  • 379lung
  • 308pancreas
  • 300intestine
  • 282musculature of body
  • 255skin of body
  • 196limb
  • 195liver
  • 190large intestine
  • 185embryo
  • 152eye
  • 148extraembryonic component
  • 131adipose tissue
  • 112stomach
  • 111muscle organ
  • 95bone element
  • 90mammary gland
  • 88adrenal gland
  • 88uterus
  • 84artery
  • 84placenta
  • 84thymus
  • 79small intestine
  • 73prostate gland
  • 60__MARKER__
  • 55gonad
  • 55ureter
  • 54spleen
  • 49lymph node
  • 46penis
  • 43thyroid gland
  • 41spinal cord
  • 38esophagus
  • 28ovary
  • 26testis
  • 23skeleton
  • 22nerve
  • 20lymphoid tissue
  • 19lymphatic vessel
  • 17mouth
  • 14bronchus
  • 13pituitary gland
  • 12bone marrow
  • 12breast
  • 12urinary bladder
  • 10tongue
  • 10vagina
  • 5trachea
  • 4nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 11214AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 17community
  • 5ITG
Genome assembly (visualization)
  • 6045hg19
  • 3818GRCh38
  • 4hg18
award.rfa!
  • AMP2
software_used.software.name!
  • encode-ccres
BIOSAMPLE
TYPE

11929 results

search-icontable-tab-icon
Clear Filters
target gene predictions
pQTL
accessible chromatin
histone modifications
chromatin state
candidate regulatory elements
binding sites
gene expression
differential activity
eQTL
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart385121191412
head of caudate nucleus86
stomach4231191911
brain302318161121
primary cell
monocyte2188611544121
fibroblast283811026
endothelial cell17201252521
CD8-positive, alpha-beta T cell2743012
T-cell64
cell line
A549331118182
HeLa-S359331
H1-hESC39111128
K5623011762
MCF-71312553
in vitro differentiated cells
hematopoietic multipotent progenitor cell2211101011
neural progenitor cell61015447
adipocyte7416211
embryonic stem cell15151
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
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