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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 3013target gene predictions
  • 2638pQTL
  • 1671candidate regulatory elements
  • 1186accessible chromatin
  • 977histone modifications
  • 944chromatin state
  • 811binding sites
  • 632gene expression
  • 484differential activity
  • 141variant allelic effects
  • 72Fine-mapped variants
  • 59eQTL
  • 8caQTL
  • 5hQTL
  • 4sQTL
  • 3meQTL
  • 3other
  • 2variant to gene
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 2582February, 2021
  • 2511September, 2022
  • 1984July, 2026
  • 389May, 2021
  • 333November, 2021
  • 320February, 2024
  • 320May, 2026
  • 289June, 2020
  • 281September, 2023
  • 155May, 2020
  • 128March, 2020
  • 96October, 2022
  • 89January, 2020
  • 82August, 2021
  • 64March, 2023
  • 63February, 2020
  • 56January, 2021
  • 43May, 2022
  • 41November, 2022
  • 35August, 2017
  • 32February, 2023
  • 30March, 2024
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 5January, 2022
  • 4March, 2026
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 7858bed bed3+
  • 3484tsv
  • 869bed bed9
  • 512bigWig
  • 87txt
  • 40bigBed bed9
  • 34bed bed9+
  • 24csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 12606Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1848ChIP-Atlas
  • 1458ENCODE-rE2G
  • 960ENCODE
  • 528DGA
  • 513AMP
  • 406T2DKP
  • 393HDMA
  • 320T1D
  • 320pyxis
  • 281KPMP
  • 219BLUEPRINT
  • 1744DN
  • 151GTEx
  • 140 T2DKP
  • 133CATlas
  • 91CMDGA
  • 67HPAP
  • 12ROADMAP
  • 10T2D
Biosample type
  • 5872tissue
  • 3721primary cell
  • 2549cell line
  • 507in vitro differentiated cells
  • 3stem cell
Organ
  • 3365blood
  • 2885vasculature
  • 2853bodily fluid
  • 2844blood vessel
  • 2659vein
  • 900epithelium
  • 883brain
  • 720kidney
  • 495connective tissue
  • 459heart
  • 439lung
  • 358musculature of body
  • 355intestine
  • 309pancreas
  • 293skin of body
  • 242limb
  • 224large intestine
  • 215embryo
  • 203liver
  • 173extraembryonic component
  • 160eye
  • 139adipose tissue
  • 139stomach
  • 111muscle organ
  • 104bone element
  • 104mammary gland
  • 101adrenal gland
  • 96placenta
  • 96small intestine
  • 93thymus
  • 92uterus
  • 86prostate gland
  • 85artery
  • 73ureter
  • 64penis
  • 62lymph node
  • 62spleen
  • 61gonad
  • 60__MARKER__
  • 48spinal cord
  • 46thyroid gland
  • 45esophagus
  • 31ovary
  • 29testis
  • 24lymphoid tissue
  • 24nerve
  • 22skeleton
  • 21lymphatic vessel
  • 20mouth
  • 16bronchus
  • 14breast
  • 13bone marrow
  • 13urinary bladder
  • 12pituitary gland
  • 12tongue
  • 11vagina
  • 5trachea
  • 4nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 11943AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 6882hg19
  • 3716GRCh38
  • 4hg18
award.rfa!
  • AMP2
software_used.software.name!
  • qTLtools
BIOSAMPLE
TYPE

12654 results

search-icontable-tab-icon
Clear Filters
target gene predictions
pQTL
candidate regulatory elements
accessible chromatin
histone modifications
chromatin state
binding sites
gene expression
differential activity
variant allelic effects
Fine-mapped variants
eQTL
caQTL
hQTL
sQTL
meQTL
other
variant to gene
representative DNase hypersensitivity sites
tissue
whole blood26351
heart383751211412
stomach424031191
head of caudate nucleus86
brain30292318111
primary cell
monocyte2188611541211
fibroblast28381106
endothelial cell17201252521
CD8-positive, alpha-beta T cell27743012
T-cell644
cell line
A549332111182
HeLa-S359531
H1-hESC39111128
K5623071172
MCF-71391253
in vitro differentiated cells
hematopoietic multipotent progenitor cell2219111011
neural progenitor cell65101547
adipocyte7441611
embryonic stem cell15151
mesenchymal stem cell431121
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
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