Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Embedding Matrix
Click or enter search terms to filter the experiments included in the matrix.
Embeddings type
49
Gene expression
11
Accessible chromatin
Date released
27
May, 2022
9
June, 2025
8
April, 2025
4
February, 2025
2
August, 2021
2
October, 2024
2
September, 2021
1
February, 2021
1
February, 2023
1
March, 2023
1
March, 2024
1
September, 2020
1
September, 2023
Available data
43
h5ad
13
rds
8
tsv
6
mtx
1
bed bed3
1
cloupe
1
tbi
Organism
57
Homo sapiens
Biosample type
60
tissue
7
primary cell
Organ
9
pancreas
7
musculature of body
5
adipose tissue
5
connective tissue
5
liver
5
vasculature
4
artery
4
blood vessel
4
heart
3
blood
3
bodily fluid
3
kidney
3
lung
2
bone element
2
intestine
2
mouth
1
bone marrow
1
brain
1
eye
1
large intestine
1
lymph node
1
mammary gland
1
prostate gland
1
skin of body
1
small intestine
1
spleen
1
thymus
1
tongue
1
trachea
1
uterus
Project
54
AMP
2
LungMap
2
T1D
2
community
Genome assembly (visualization)
1
hg19
award.rfa!
ENCODE3
BIOSAMPLE
TYPE
60 results
search-icon
table-tab-icon
Clear Filters
Gene expression
Accessible chromatin
tissue
islet of Langerhans
2
4
heart
5
liver
4
1
pancreas
4
1
artery
3
1
+ See 29 more…
primary cell
islet of Langerhans
1
1
pancreas
1
1
peripheral blood mononuclear cell
1
1
See all biosamples