Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 54accessible chromatin
  • 48gene expression
  • 37target gene predictions
  • 33differential activity
  • 24candidate regulatory elements
  • 17chromatin state
  • 15eQTL
  • 11variant allelic effects
  • 6histone modifications
  • 5Fine-mapped variants
  • 5binding sites
  • 2sQTL
  • 2variant to gene
Date released
  • 47March, 2023
  • 44September, 2022
  • 33May, 2021
  • 31February, 2021
  • 25February, 2024
  • 20January, 2021
  • 9March, 2020
  • 8August, 2021
  • 7August, 2018
  • 6May, 2020
  • 6October, 2019
  • 4January, 2020
  • 4January, 2022
  • 4June, 2020
  • 3August, 2017
  • 2February, 2020
  • 2November, 2019
  • 1April, 2019
  • 1February, 2023
  • 1January, 2018
  • 1June, 2021
Available data
  • 153bed bed3+
  • 76tsv
  • 46bigWig
  • 14bigBed narrowPeak
  • 13bed bed9
  • 3bam
  • 3bed gappedPeak
  • 3csv
  • 3xls
  • 2bigBed bed9
Organism
  • 259Homo sapiens
Collection Tags
  • 67 T2DKP
  • 48HPAP
  • 48T1D
  • 39EpiMap
  • 31DGA
  • 29T2DKP
  • 24AMP
  • 14ChIP-Atlas
  • 11ENCODE
  • 9CMDGA
  • 7T2D
  • 5GTEx
  • 4eQTLCatalogue
Biosample type
  • 114tissue
  • 108primary cell
  • 34cell line
  • 3in vitro differentiated cells
Organ
  • 2907vasculature
  • 2859bodily fluid
  • 2848blood
  • 2845blood vessel
  • 2658vein
  • 831epithelium
  • 649kidney
  • 467brain
  • 430connective tissue
  • 369musculature of body
  • 302lung
  • 270intestine
  • 259pancreas
  • 247heart
  • 244limb
  • 213embryo
  • 194skin of body
  • 168large intestine
  • 158liver
  • 143extraembryonic component
  • 110stomach
  • 105eye
  • 99adipose tissue
  • 88bone element
  • 81mammary gland
  • 81uterus
  • 80small intestine
  • 79artery
  • 78prostate gland
  • 71placenta
  • 64penis
  • 64ureter
  • 63adrenal gland
  • 62lymph node
  • 48gonad
  • 48thymus
  • 43spinal cord
  • 41esophagus
  • 34spleen
  • 26testis
  • 25nerve
  • 24lymphoid tissue
  • 21lymphatic vessel
  • 21ovary
  • 21thyroid gland
  • 19mouth
  • 18skeleton
  • 14bronchus
  • 13breast
  • 13pituitary gland
  • 12bone marrow
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 237AMP
  • 20T1D
  • 2community
Genome assembly (visualization)
  • 168hg19
  • 43GRCh38
award.rfa!
  • ENCODE3
BIOSAMPLE
TYPE

259 results

search-icontable-tab-icon
Clear Filters
accessible chromatin
gene expression
target gene predictions
differential activity
candidate regulatory elements
chromatin state
eQTL
variant allelic effects
histone modifications
Fine-mapped variants
binding sites
sQTL
variant to gene
tissue
islet of Langerhans6111313112222
body of pancreas2584113
pancreas55531111
endocrine pancreas474
pancreatic ductal cell2
primary cell
pancreatic beta cell63331
pancreatic ductal cell4323121
pancreatic alpha cell53331
pancreatic delta cell43331
pancreatic acinar cell33231
cell line
EndoC_BH188131
Panc1221
8988T111
HPDE6-E6E7111
pancreatic acinar cell1
in vitro differentiated cells
pancreatic ductal cell3
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego