Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2874target gene predictions
  • 2636pQTL
  • 1671candidate regulatory elements
  • 977histone modifications
  • 944chromatin state
  • 916accessible chromatin
  • 811binding sites
  • 459gene expression
  • 363differential activity
  • 158eQTL
  • 140variant allelic effects
  • 74Fine-mapped variants
  • 6caQTL
  • 5hQTL
  • 5sQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 2583February, 2021
  • 2511September, 2022
  • 1984July, 2026
  • 389May, 2021
  • 320May, 2026
  • 319February, 2024
  • 289June, 2020
  • 155May, 2020
  • 128March, 2020
  • 106January, 2022
  • 94October, 2022
  • 89January, 2020
  • 75August, 2021
  • 64February, 2020
  • 61March, 2023
  • 43May, 2022
  • 41November, 2022
  • 35August, 2017
  • 31February, 2023
  • 30March, 2024
  • 14November, 2019
  • 14October, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 7546bed bed3+
  • 3206tsv
  • 869bed bed9
  • 243bigWig
  • 83txt
  • 40bigBed bed9
  • 34bed bed9+
  • 24csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 12003Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1848ChIP-Atlas
  • 1458ENCODE-rE2G
  • 960ENCODE
  • 528DGA
  • 393HDMA
  • 362T1D
  • 320pyxis
  • 219BLUEPRINT
  • 1744DN
  • 172AMP
  • 151GTEx
  • 133CATlas
  • 113 T2DKP
  • 111T2D
  • 101eQTLCatalogue
  • 88CMDGA
  • 67HPAP
  • 66T2DKP
  • 12ROADMAP
Biosample type
  • 5925tissue
  • 3064primary cell
  • 2550cell line
  • 507in vitro differentiated cells
  • 3stem cell
Organ
  • 3363blood
  • 2851bodily fluid
  • 2842vasculature
  • 2820blood vessel
  • 2659vein
  • 900brain
  • 589epithelium
  • 578kidney
  • 450heart
  • 428lung
  • 427connective tissue
  • 349musculature of body
  • 339intestine
  • 286skin of body
  • 279pancreas
  • 244limb
  • 220large intestine
  • 213embryo
  • 199liver
  • 171extraembryonic component
  • 157eye
  • 142adipose tissue
  • 131stomach
  • 111muscle organ
  • 101bone element
  • 98mammary gland
  • 95placenta
  • 93small intestine
  • 92adrenal gland
  • 92thymus
  • 91uterus
  • 87prostate gland
  • 83artery
  • 73ureter
  • 64penis
  • 63spleen
  • 62gonad
  • 62lymph node
  • 60__MARKER__
  • 49spinal cord
  • 45thyroid gland
  • 44esophagus
  • 31testis
  • 30ovary
  • 25nerve
  • 24lymphoid tissue
  • 22skeleton
  • 21mouth
  • 15breast
  • 13bronchus
  • 13pituitary gland
  • 13urinary bladder
  • 12lymphatic vessel
  • 12tongue
  • 12vagina
  • 10bone marrow
  • 5trachea
  • 4nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 12050AMP
Genome assembly (visualization)
  • 6466hg19
  • 3482GRCh38
  • 4hg18
biosample_term_name!
  • blood
BIOSAMPLE
TYPE

12050 results

search-icontable-tab-icon
Clear Filters
target gene predictions
histone modifications
gene expression
accessible chromatin
chromatin state
hQTL
eQTL
meQTL
sQTL
other
tissue
whole blood26351
heart3837121513
stomach4240119311
brain30293182112
head of caudate nucleus86
primary cell
monocyte1861711544
T-cell644
CD8-positive, alpha-beta T cell25730122
fibroblast24241102
common myeloid progenitor, CD34-positive262713
cell line
A549332111812
HeLa-S359531
H1-hESC39111128
K5623071712
MCF-71392513
in vitro differentiated cells
hematopoietic multipotent progenitor cell2219110111
neural progenitor cell65154107
adipocyte7416411
embryonic stem cell11551
mesenchymal stem cell431211
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego