Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 1692target gene predictions
  • 888histone modifications
  • 775binding sites
  • 734candidate regulatory elements
  • 726accessible chromatin
  • 433chromatin state
  • 363differential activity
  • 356gene expression
  • 91variant allelic effects
  • 49eQTL
  • 5hQTL
  • 4caQTL
  • 3meQTL
  • 3sQTL
  • 2other
  • 1representative DNase hypersensitivity sites
Date released
  • 1949February, 2021
  • 1320July, 2026
  • 1134September, 2022
  • 358May, 2021
  • 320May, 2026
  • 298February, 2024
  • 226June, 2020
  • 95May, 2020
  • 94October, 2022
  • 55March, 2023
  • 50January, 2022
  • 44August, 2021
  • 41May, 2022
  • 27January, 2020
  • 24March, 2020
  • 24November, 2022
  • 16August, 2017
  • 16February, 2020
  • 9August, 2018
  • 9October, 2019
  • 5February, 2023
  • 4November, 2019
  • 3November, 2020
  • 2March, 2024
  • 1July, 2020
  • 1June, 2021
Available data
  • 4966bed bed3+
  • 383bed bed9
  • 371tsv
  • 130bigWig
  • 83txt
  • 34bed bed9+
  • 24csv
  • 16bigBed narrowPeak
  • 9bigBed bed9
  • 3bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 6080Homo sapiens
Collection Tags
  • 1661ChIP-Atlas
  • 1122EpiMap
  • 794ENCODE-rE2G
  • 465ENCODE
  • 393HDMA
  • 385DGA
  • 320pyxis
  • 296T1D
  • 218BLUEPRINT
  • 1744DN
  • 133CATlas
  • 130AMP
  • 55HPAP
  • 55T2D
  • 45 T2DKP
  • 45eQTLCatalogue
  • 38CMDGA
  • 31T2DKP
  • 12ROADMAP
  • 2GTEx
Biosample type
  • tissue
  • 3064primary cell
  • 2550cell line
  • 507in vitro differentiated cells
  • 3stem cell
Organ
  • 727blood
  • 528epithelium
  • 335connective tissue
  • 331brain
  • 256skin of body
  • 222kidney
  • 214bodily fluid
  • 195lung
  • 184heart
  • 178embryo
  • 153pancreas
  • 134liver
  • 124vasculature
  • 96mammary gland
  • 91blood vessel
  • 82eye
  • 78bone element
  • 76uterus
  • 71prostate gland
  • 62intestine
  • 62lymph node
  • 62penis
  • 60__MARKER__
  • 58large intestine
  • 57adipose tissue
  • 49extraembryonic component
  • 49muscle organ
  • 44musculature of body
  • 36artery
  • 35thymus
  • 24spleen
  • 22vein
  • 21thyroid gland
  • 15adrenal gland
  • 13bronchus
  • 13placenta
  • 12lymphatic vessel
  • 10bone marrow
  • 10gonad
  • 10pituitary gland
  • 9testis
  • 8limb
  • 8mouth
  • 7esophagus
  • 7spinal cord
  • 6lymphoid tissue
  • 5trachea
  • 4nose
  • 3skeleton
  • 2stomach
  • 2urinary bladder
  • 1pericardium
Project
  • 6125AMP
Genome assembly (visualization)
  • 4023hg19
  • 2091GRCh38
  • 1hg18
biosample_type!
  • tissue
BIOSAMPLE
TYPE

6125 results

search-icontable-tab-icon
Clear Filters
target gene predictions
histone modifications
binding sites
candidate regulatory elements
accessible chromatin
chromatin state
differential activity
gene expression
variant allelic effects
eQTL
hQTL
caQTL
meQTL
sQTL
other
representative DNase hypersensitivity sites
primary cell
monocyte1861174154211
T-cell644
CD8-positive, alpha-beta T cell25307212
fibroblast241241062
common myeloid progenitor, CD34-positive262713
cell line
A549331221118
HeLa-S359153
H1-hESC39121118
K5623012717
MCF-71323915
in vitro differentiated cells
hematopoietic multipotent progenitor cell2211191101
neural progenitor cell61551047
adipocyte7114461
embryonic stem cell11155
mesenchymal stem cell411312
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego