Experiment Matrix

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BIOSAMPLE

	ASSAY
898 results Clear Filters	ChIP-seq	ATAC-seq	single cell RNA-seq	RNA microarray	total RNA-seq	pCHi-C	Hi-C	RRBS	MeRIP-seq	WGBS	GRO-seq	DNase-seq	snDrop-seq	Capture-C	snATAC-seq	CRISPR genome editing followed by sgRNA sequencing	DNAme array	MPRA
tissue
islet of Langerhans	41	17			18	4	1	1	4						1
bone element				84
liver	23	20	1		20	1	1	1		3
left cardiac atrium	40		18
subcutaneous abdominal adipose tissue	36									3
coronary artery		35			1
skeletal muscle tissue	22	1	1					4							1
heart left ventricle	1		18			1	1	1		2
heart right ventricle			17			1	1
right cardiac atrium			18			1
retina		15			3
pigmented layer of retina		12			2
brain	7	1						1
kidney			6					1
adipose tissue		3			1	1				1
aorta			4			1	1
cingulate gyrus	6
gastrocnemius medialis					1		4
aortic valve			4
pancreas					1	1	1	1
pulmonary valve			4
tricuspid valve			4
layer of hippocampus	3
mitral valve			3
psoas muscle						1	2
right lobe of liver					1					1		1
substantia nigra	2				1
Ammon's horn					1	1
acetabular part of hip bone		1			1
cardiac atrium			2
cardiac ventricle			2
caudate nucleus	1				1
heart			1				1
ilium		1			1
interventricular septum			2
ischium		1			1
pubis		1			1
pulmonary artery			2
subcutaneous adipose tissue				1	1
C1 segment of cervical spinal cord					1
adrenal gland						1
amygdala					1
anterior cingulate cortex					1
ascending aorta					1
bladder (urinary bladder)						1
body of pancreas					1
cerebellum					1
cerebellum (Hemisphere)					1
dorsal plus ventral thalamus	1
dorsolateral prefrontal cortex						1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))					1
esophagus						1
frontal cortex					1
gastric (mucosa of stomach)						1
hypothalamus					1
kidney (Cortex-Medulla)													1
kidney (cortex)													1
kidney (medulla)													1
kidney interstitium				1
left ventricle myocardium					1
lung						1
middle frontal area 46	1
nucleus accumbens					1
omental fat pad					1
ovary						1
pericardium								1
planum polare	1
putamen					1
renal glomerulus				1
right atrium auricular region					1
sigmoid colon						1
small intestine						1
spleen						1
thymus						1
tibial artery					1
tibial nerve					1
primary cell
CD8-positive, alpha-beta T cell	33				2
naive thymus-derived CD4-positive, alpha-beta T cell	2	22			1
CD4-positive, alpha-beta memory T cell		22
macrophage		11
gabaergic neuron		3
glutamatergic neuron		3
microglial cell/astrocyte		3
monocyte	1				1												1
oligodendrocyte		3
endothelial cell of umbilical vein							2
neutrophil	1				1
pancreatic cell			2
astrocyte of the cerebellum							1
brain microvascular endothelial cell							1
brain pericyte							1
cardiac fibroblast								1
cardiac muscle cell								1
choroid plexus epithelial cell								1
endothelial cell of hepatic sinusoid							1
epithelial cell of proximal tubule								1
hepatocyte								1
kidney epithelial cell								1
kidney glomerular epithelial cell												1
kidney tubule cell												1
renal cortical epithelial cell								1
retinal pigment epithelial cell								1
skeletal muscle cell								1
skeletal muscle myoblast								1
in vitro differentiated cells
embryonic stem cell	37	5			5	1
adipocyte	14	7			1
cardiomyocytes (cardiac muscle cell)			2			2	2
chondrocyte		5
immature adipocyte		2			2
lymphocyte of B lineage (iPSC)						1	1
preadipocyte		1			1
Posterior foregut											1
cardiac precursors (cardiac muscle cell)							1
definitive endodermal cell											1
neural progenitor cell	1
pancreatic endoderm											1
primitive gut cell											1
white fat cell						1
cell line
EndoC_BH1		18					1		6					2		1
HepG2	1					2	1
GM12878		1
MCF-7						1
MIN6																		1
Panc1							1
RCC 7860 VHL						1
RCC 7860 vector						1
fibroblast cell line						1
stem cell
hESC											1
mesenchymal stem cell						1
mesendoderm						1
neural progenitor cell (neural stem cell)						1
trophoblast						1

Experiment Matrix

Assay

Assay category

Target of assay

Date released

Available data

Organism

Biosample type

Organ

Project

Genome assembly (visualization)

Lab

Audit category:

Audit category:

Audit category:

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898 results