Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2638pQTL
  • 1671candidate regulatory elements
  • 1213target gene predictions
  • 977histone modifications
  • 811binding sites
  • 593accessible chromatin
  • 465gene expression
  • 178eQTL
  • 140variant allelic effects
  • 84Fine-mapped variants
  • 75chromatin state
  • 53differential activity
  • 6caQTL
  • 5hQTL
  • 5sQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2583February, 2021
  • 1678September, 2022
  • 384May, 2021
  • 324February, 2024
  • 289June, 2020
  • 152May, 2020
  • 128March, 2020
  • 106January, 2022
  • 94October, 2022
  • 83January, 2020
  • 77August, 2021
  • 64February, 2020
  • 61March, 2023
  • 43May, 2022
  • 41November, 2022
  • 38March, 2025
  • 35August, 2017
  • 31February, 2023
  • 30March, 2024
  • 13November, 2019
  • 9August, 2018
  • 9October, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 1April, 2019
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 5564bed bed3+
  • 3252tsv
  • bed bed9
  • 243bigWig
  • 83txt
  • 40bigBed bed9
  • 34bed bed9+
  • 24csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 8878Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1848ChIP-Atlas
  • 1666EpiMap
  • 960ENCODE
  • 523DGA
  • 362T1D
  • 219BLUEPRINT
  • 1744DN
  • 173AMP
  • 151GTEx
  • 113 T2DKP
  • 111T2D
  • 101eQTLCatalogue
  • 88CMDGA
  • 67HPAP
  • 67T2DKP
  • 43STARNET
  • 12ROADMAP
Biosample type
  • 4817tissue
  • 2164cell line
  • 1517primary cell
  • 423in vitro differentiated cells
  • 3stem cell
Organ
  • 2834bodily fluid
  • 2825blood
  • 2820vasculature
  • 2782blood vessel
  • 2654vein
  • 539epithelium
  • 398brain
  • 397kidney
  • 342connective tissue
  • 284musculature of body
  • 229lung
  • 224pancreas
  • 215intestine
  • 199heart
  • 194limb
  • 186embryo
  • 160skin of body
  • 135large intestine
  • 118liver
  • 110extraembryonic component
  • 96eye
  • 91adipose tissue
  • 87stomach
  • 77uterus
  • 72bone element
  • 67mammary gland
  • 66artery
  • 65prostate gland
  • 61small intestine
  • 55placenta
  • 54lymph node
  • 54penis
  • 51ureter
  • 49adrenal gland
  • 40gonad
  • 37thymus
  • 35spinal cord
  • 34esophagus
  • 28spleen
  • 22testis
  • 21nerve
  • 19lymphoid tissue
  • 17ovary
  • 17thyroid gland
  • 15mouth
  • 15skeleton
  • 13pituitary gland
  • 11breast
  • 11bronchus
  • 10lymphatic vessel
  • 9bone marrow
  • 8tongue
  • 8urinary bladder
  • 8vagina
  • 5trachea
  • 3nose
  • 1pericardium
Project
  • 8925AMP
Genome assembly (visualization)
  • 5599hg19
  • 634GRCh38
  • 4hg18
files.file_type!
  • bed bed9
BIOSAMPLE
TYPE

8925 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
gene expression
eQTL
variant allelic effects
Fine-mapped variants
chromatin state
differential activity
caQTL
hQTL
sQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart372011532
stomach40211311
brain2916312121
lung331711
cell line
HeLa-S35551
H1-hESC1391218
A5492119121
K5627231211
EndoC_BH11118811
primary cell
monocyte186117154211
CD8-positive, alpha-beta T cell7330221
common myeloid progenitor, CD34-positive2714
B cell141022
CD14-positive monocyte819
in vitro differentiated cells
neural progenitor cell5515107
hematopoietic multipotent progenitor cell19101111
adipocyte4611414
cardiomyocytes11
extended pluripotent stem (EPS) cells9
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego