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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 84RNA microarray
  • 10total RNA-seq
  • 5single cell RNA-seq
  • 1MPRA
  • 1snATAC-seq
Assay category
  • 15Transcription
  • 1DNA accessibility
Date released
  • 89February, 2021
  • 7May, 2022
  • 4February, 2023
  • 1October, 2022
Available data
  • 3206bam
  • 2953bigWig
  • 1647bed narrowPeak
  • 1486tsv
  • 1188fastq
  • 1042bigBed narrowPeak
  • 321bed broadPeak
  • 314tagAlign
  • 285bigBed broadPeak
  • 271bed bed3+
  • 101txt
  • 36bed bedMethyl
  • 36bigBed bedMethyl
  • 18bedpe bed3+
  • 16hic
  • 12bed bed3
  • 8csv
  • 5hdf5
  • 4bed bedgraph
  • 4tar
  • 2ibed
  • 1tagAlign bed3+
Organism
  • 100Homo sapiens
Biosample type
  • 100tissue
  • 1cell line
Organ
  • 88bone element
  • 6pancreas
  • 5kidney
  • 4skeleton
  • 1musculature of body
Project
  • 101AMP
Genome assembly (visualization)
  • 1hg19
Lab
  • 95AMP-T2D consortium
  • 6Kyle Gaulton, UCSD
Audit category:
  • 84inconsistent ontology term
  • 6audit script error
BIOSAMPLE
ASSAY

101 results

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RNA microarray
total RNA-seq
single cell RNA-seq
MPRA
snATAC-seq
tissue
bone element84
islet of Langerhans6
kidney5
acetabular part of hip bone1
ilium1
cell line
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