Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 138gene expression
  • 100candidate regulatory elements
  • 98accessible chromatin
  • 63target gene predictions
  • 53chromatin state
  • 41variant allelic effects
  • 37binding sites
  • 28differential activity
  • 28histone modifications
  • 2eQTL
  • 1caQTL
Date released
  • 196February, 2021
  • 151September, 2022
  • 49February, 2024
  • 36March, 2023
  • 34May, 2021
  • 25June, 2020
  • 15May, 2020
  • 15November, 2022
  • 14January, 2020
  • 12February, 2023
  • 9February, 2020
  • 6August, 2018
  • 6March, 2020
  • 5October, 2019
  • 5October, 2022
  • 3August, 2017
  • 3August, 2021
  • 2March, 2024
  • 1July, 2020
  • 1May, 2022
  • 1November, 2019
Available data
  • 367bed bed3+
  • 148tsv
  • 66txt
  • 59bigWig
  • 50bed bed9
  • 14bigBed narrowPeak
  • 6csv
  • 3bam
  • 3bed gappedPeak
  • 3xls
  • 2bigBed bed9
Organism
  • 589Homo sapiens
Collection Tags
  • 152DGA
  • 144EpiMap
  • 81ChIP-Atlas
  • 62ENCODE
  • 44HPAP
  • 28CMDGA
  • 24 T2DKP
  • 21AMP
  • 21T2DKP
  • 15T1D
  • 4T2D
  • 2GTEx
Biosample type
  • 461primary cell
  • 61tissue
  • 41cell line
  • 26in vitro differentiated cells
Organ
  • 2859bodily fluid
  • 2852vasculature
  • 2848blood
  • 2809blood vessel
  • 2658vein
  • 589epithelium
  • 474kidney
  • 464brain
  • 383connective tissue
  • 355musculature of body
  • 299lung
  • 270intestine
  • 245heart
  • 244limb
  • 237pancreas
  • 213embryo
  • 194skin of body
  • 168large intestine
  • 143extraembryonic component
  • 132liver
  • 110stomach
  • 105eye
  • 99adipose tissue
  • 86bone element
  • 81mammary gland
  • 81uterus
  • 80small intestine
  • 78prostate gland
  • 74artery
  • 71placenta
  • 64penis
  • 64ureter
  • 63adrenal gland
  • 62lymph node
  • 48gonad
  • 48thymus
  • 43spinal cord
  • 41esophagus
  • 34spleen
  • 26testis
  • 25nerve
  • 24lymphoid tissue
  • 21ovary
  • 21thyroid gland
  • 19mouth
  • 18skeleton
  • 13breast
  • 13bronchus
  • 13pituitary gland
  • 12lymphatic vessel
  • 10bone marrow
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 589AMP
Genome assembly (visualization)
  • 418hg19
  • 82GRCh38
BIOSAMPLE
TYPE

589 results

search-icontable-tab-icon
Clear Filters
gene expression
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
variant allelic effects
binding sites
differential activity
histone modifications
eQTL
caQTL
primary cell
epithelial cell of proximal tubule15211111
hepatocyte81221214
endothelial cell of umbilical vein624512
glomerular endothelial cell1322111
foreskin keratinocyte1144
tissue
pigmented layer of retina20
breast epithelium5132
esophagus squamous epithelium6122
kidney epithelium11
pancreatic ductal cell2
cell line
EndoC_BH188111
keratinocyte31
choroid plexus epithelial cell111
colon epithelial cell111
epithelial cell of prostate111
in vitro differentiated cells
retinal pigment epithelial cell6
hepatocyte211
foreskin keratinocyte111
hepatocyte(AFP)3
mammary gland epithelial cell111
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego