Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 1248total RNA-seq
  • 214single cell RNA-seq
  • 86RNA microarray
  • 18small RNA-seq
  • 10MeRIP-seq
  • 3snDrop-seq
Assay category
  • 1480Transcription
Target of assay
  • 5control
  • 5nucleotide modification
Date released
  • 637February, 2021
  • 168July, 2018
  • 145May, 2020
  • 131May, 2021
  • 113August, 2021
  • 89August, 2017
  • 49April, 2018
  • 49July, 2019
  • 27May, 2022
  • 27September, 2018
  • 26October, 2019
  • 25February, 2020
  • 20November, 2019
  • 15February, 2018
  • 14November, 2020
  • 13February, 2023
  • 11March, 2020
  • 10December, 2019
  • 3August, 2018
  • 3June, 2018
  • 2October, 2018
  • 1May, 2023
  • 1November, 2018
Available data
  • 1415tsv
  • 1282bam
  • 1278bigWig
  • 240fastq
  • 99txt
  • 8csv
  • 2bed bed3+
Organism
  • 1579Homo sapiens
Biosample type
  • 1192tissue
  • 146primary cell
  • 138in vitro differentiated cells
  • 103cell line
Organ
  • 475connective tissue
  • 426pancreas
  • 400adipose tissue
  • 179liver
  • 162heart
  • 148epithelium
  • 146bone element
  • 65blood vessel
  • 65vasculature
  • 56artery
  • 21brain
  • 19eye
  • 19kidney
  • 14embryo
  • 8musculature of body
  • 4skeleton
  • 3limb
  • 1nerve
  • 1spinal cord
Project
  • 1579AMP
Genome assembly (visualization)
  • 1279hg19
  • 1277GRCh38
Lab
  • 1535AMP-T2D consortium
  • 20Karen Mohlke, UNC
  • 14Kyle Gaulton, UCSD
  • 10Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
  • 223inconsistent ontology term
  • 9audit script error
BIOSAMPLE
ASSAY

1579 results

search-icontable-tab-icon
Clear Filters
total RNA-seq
single cell RNA-seq
RNA microarray
small RNA-seq
MeRIP-seq
snDrop-seq
tissue
adipose tissue382
islet of Langerhans28464
liver16711
bone element84
bone tissue58
primary cell
pancreatic alpha cell1012
pancreatic beta cell1012
pancreatic acinar cell412
pancreatic ductal cell410
pancreatic delta cell11
in vitro differentiated cells
cardiomyocytes59
cardiac precursors (cardiac muscle cell)19
induced pluripotent stem cell9
embryonic stem cell7
neural progenitor cell7
cell line
smooth muscle cell of the coronary artery52
EndoC_BH1316
H1-hESC8
early embryonic cell2
RCC 7860 HIF1a re-expression1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego