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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 14ChIP-seq
  • 6ATAC-seq
Assay category
  • 14DNA binding
  • 6DNA accessibility
Target of assay
  • 11transcription factor
  • 3histone
  • 3histone modification
  • 2narrow histone mark
  • 1RNA binding protein
  • 1broad histone mark
Date released
  • 16August, 2021
  • 3February, 2023
  • 1October, 2017
Available data
  • 82bed narrowPeak
  • 64xls
  • 60txt
  • 20bigWig
  • 10tsv
  • 3bed bedgraph
  • 3hic
  • 2bed bed3+
  • 2bedpe bed3+
  • 1bed broadPeak
  • 1bedpe
  • 1fastq
  • 1vcf
Organism
  • 20Homo sapiens
Biosample type
  • 14cell line
  • 5in vitro differentiated cells
  • 1tissue
Organ
  • 14liver
  • 2connective tissue
  • 1pancreas
Project
  • 20AMP
Genome assembly (visualization)
  • 20hg19
  • 1GRCh38
Lab
  • 14Bing Ren, UCSD
  • 5Struan F.A. Grant, CHOP
  • 1Stephen Parker, UMich
Audit category:
  • 1inconsistent ontology term
BIOSAMPLE
ASSAY

20 results

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Clear Filters
ChIP-seq
ATAC-seq
cell line
HepG214
in vitro differentiated cells
Progenitor cell of Hypothalamus (neural progenitor cell)1
adipocyte1
embryonic stem cell1
neuron cell of Hypothalamus (neuron)1
osteoblast1
tissue
islet of Langerhans1
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