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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 81ATAC-seq
  • 49total RNA-seq
  • 11single cell RNA-seq
  • 6snATAC-seq
  • 2Capture-C
  • 1Hi-C
Assay category
  • 87DNA accessibility
  • 60Transcription
  • 13D chromatin structure
Date released
  • 132August, 2021
  • 14May, 2023
  • 3February, 2023
  • 1October, 2017
Available data
  • 68bed narrowPeak
  • 64xls
  • 60txt
  • 6bigWig
  • 3bed bedgraph
  • 2bed bed3+
  • 1bed broadPeak
  • 1fastq
  • 1hic
Organism
  • 150Homo sapiens
Biosample type
  • 143tissue
  • 7in vitro differentiated cells
Organ
  • 142kidney
  • 4connective tissue
  • 1pancreas
Project
  • 150AMP
Genome assembly (visualization)
  • 76GRCh38
  • 9hg19
Lab
  • 142Katalin Susztak, Upenn
  • Bing Ren, UCSD
  • 7Struan F.A. Grant, CHOP
  • 1Stephen Parker, UMich
Audit category:
  • 1inconsistent ontology term
lab.title!
  • Bing Ren, UCSD
BIOSAMPLE
ASSAY

150 results

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Clear Filters
ATAC-seq
total RNA-seq
single cell RNA-seq
snATAC-seq
Capture-C
Hi-C
tissue
kidney75491161
islet of Langerhans1
in vitro differentiated cells
adipocyte11
osteoblast11
Progenitor cell of Hypothalamus (neural progenitor cell)1
embryonic stem cell1
neuron cell of Hypothalamus (neuron)1
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