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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 53accessible chromatin
  • 44gene expression
  • 38candidate regulatory elements
  • 17caQTL
  • 15eQTL
  • 5target gene predictions
Date released
  • 46August, 2021
  • 38May, 2024
  • 33July, 2025
  • 29February, 2024
  • 7February, 2021
  • 6May, 2022
  • 5October, 2022
  • 5September, 2023
  • 3November, 2022
Available data
  • 92bed bed3+
  • 53tsv
  • 25txt
  • 20bigWig
  • 12bed bed3
  • 12bed narrowPeak
Organism
  • 172Homo sapiens
Collection Tags
  • 93DGA
  • 33 T2DKP
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 11AMP
  • 6ENCODE
  • 3CMDGA
Biosample type
  • 149primary cell
  • 15tissue
  • 7in vitro differentiated cells
  • 1stem cell
Organ
  • 37epithelium
  • 35kidney
  • 26musculature of body
  • 21connective tissue
  • 3brain
  • 3lymphatic vessel
  • 3vasculature
  • 2heart
  • 2liver
Project
  • 172AMP
Genome assembly (visualization)
  • 104hg19
  • 63GRCh38
Encyclopedia version
  • 1Adipocyte.narrowpeak.bed.gz Adipocyte.consensus_summit_features.bed.gz
  • 1Endothelial.narrowpeak.bed.gz Endothelial.consensus_summit_features.bed.gz
  • 1FAP.narrowpeak.bed.gz Mesenchymal_Stem_Cell.consensus_summit_features.bed.gz
  • 1Macrophage.narrowpeak.bed.gz Macrophage.consensus_summit_features.bed.gz
  • 1Neuromuscular_junction.narrowpeak.bed.gz Neuromuscular_junction.consensus_summit_features.bed.gz
  • 1Neuronal.narrowpeak.bed.gz Neuronal.consensus_summit_features.bed.gz
  • 1Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
  • 1Smooth_Muscle.narrowpeak.bed.gz Smooth_Muscle.consensus_summit_features.bed.gz
  • 1T_cell.narrowpeak.bed.gz T_cell.consensus_summit_features.bed.gz
  • 1Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
  • 1Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
  • 1Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
lab.title!
  • Ines Cebola, Imperial College London
BIOSAMPLE
TYPE

172 results

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Clear Filters
accessible chromatin
gene expression
candidate regulatory elements
caQTL
eQTL
target gene predictions
primary cell
endothelial cell44322
smooth muscle cell31222
macrophage21311
adipocyte2121
fibroblast23
tissue
kidney771
in vitro differentiated cells
ESC dervived hypothalamic neuron (arcuate nucleus)1
ESC dervived hypothalamic progenitor (arcuate nucleus)1
Human Mesenchymal Cell derived Adipocytes1
Human Mesenchymal Cell derived Osteoblasts1
Progenitor cell of Hypothalamus (neural progenitor cell)1
stem cell
undifferentiated ESC (H9 cell line)1
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