Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 16ATAC-seq
  • 3single cell RNA-seq
  • 1Hi-C
  • 1snATAC-seq
Assay category
  • 17DNA accessibility
  • 3Transcription
  • 13D chromatin structure
Date released
  • August, 2021
  • 14May, 2023
  • 3February, 2023
  • 2March, 2019
  • 1July, 2025
  • 1October, 2017
Available data
  • 4bigWig
  • 3bed bedgraph
  • 3txt
  • 2bed narrowPeak
  • 1bed bed3+
  • 1bed broadPeak
  • 1bedpe
  • 1fastq
  • 1hic
  • 1tbi
  • 1tsv
Organism
  • 20Homo sapiens
Biosample type
  • 18tissue
  • 3in vitro differentiated cells
Organ
  • 14kidney
  • 3pancreas
  • 1musculature of body
Project
  • 21AMP
Genome assembly (visualization)
  • 14GRCh38
  • 6hg19
Lab
  • 14Katalin Susztak, Upenn
  • 3Struan F.A. Grant, CHOP
  • 2Bing Ren, UCSD
  • 2Stephen Parker, UMich
Audit category:
  • 1inconsistent ontology term
month_released!
  • August, 2021
BIOSAMPLE
ASSAY

21 results

search-icontable-tab-icon
Clear Filters
ATAC-seq
single cell RNA-seq
Hi-C
snATAC-seq
tissue
kidney113
islet of Langerhans21
skeletal muscle tissue1
in vitro differentiated cells
Progenitor cell of Hypothalamus (neural progenitor cell)1
embryonic stem cell1
neuron cell of Hypothalamus (neuron)1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego