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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ATAC-seq
4
STARR-seq
4
snATAC-seq
2
Capture-C
2
ChIP-seq
2
Hi-C
1
total RNA-seq
Assay category
11
DNA accessibility
2
3D chromatin structure
2
DNA binding
1
Transcription
Target of assay
2
transcription factor
Date released
16
August, 2021
3
February, 2023
2
March, 2019
1
October, 2017
Available data
8
bigWig
6
bed narrowPeak
3
bed bedgraph
3
txt
2
bed bed3+
1
bed broadPeak
1
bedpe
1
bedpe bed3+
1
fastq
1
hic
1
tsv
Organism
22
Homo sapiens
Biosample type
9
tissue
7
in vitro differentiated cells
6
cell line
Organ
6
kidney
5
pancreas
4
connective tissue
4
liver
Project
22
AMP
Genome assembly (visualization)
12
hg19
2
GRCh38
Lab
10
Bing Ren, UCSD
7
Struan F.A. Grant, CHOP
4
Katalin Susztak, Upenn
1
Stephen Parker, UMich
Audit category:
1
inconsistent ontology term
replication_type!
unreplicated
BIOSAMPLE
ASSAY
22 results
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Clear Filters
ATAC-seq
STARR-seq
snATAC-seq
Capture-C
ChIP-seq
Hi-C
total RNA-seq
tissue
islet of Langerhans
2
2
1
kidney
4
in vitro differentiated cells
adipocyte
1
1
osteoblast
1
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
cell line
HepG2
2
2
HEK293T
2
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