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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1709candidate regulatory elements
  • 1357target gene predictions
  • 977histone modifications
  • 913chromatin state
  • 901accessible chromatin
  • 817binding sites
  • 677gene expression
  • 184eQTL
  • 172differential activity
  • 141variant allelic effects
  • 84Fine-mapped variants
  • 8caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2590February, 2021
  • 2511September, 2022
  • 389May, 2021
  • 349February, 2024
  • 333November, 2021
  • 289June, 2020
  • 286September, 2023
  • 155May, 2020
  • 128August, 2021
  • 128March, 2020
  • 106January, 2022
  • 96October, 2022
  • 89January, 2020
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 38March, 2025
  • 32February, 2023
  • 30March, 2024
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 4August, 2017
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 6031bed bed3+
  • 3576tsv
  • 869bed bed9
  • 546bigWig
  • 108txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 10555Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1848ChIP-Atlas
  • 966ENCODE
  • 612DGA
  • 534AMP
  • 421T1D
  • 405T2DKP
  • 281KPMP
  • 219BLUEPRINT
  • 1744DN
  • 151GTEx
  • 141 T2DKP
  • 111T2D
  • 101eQTLCatalogue
  • 100CMDGA
  • 67HPAP
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5308tissue
  • 2477primary cell
  • 2347cell line
  • 466in vitro differentiated cells
  • 3stem cell
Organ
  • 2912vasculature
  • 2857bodily fluid
  • 2847blood vessel
  • 2846blood
  • 2657vein
  • 951epithelium
  • 652kidney
  • 468connective tissue
  • 461brain
  • 363musculature of body
  • 310lung
  • 285intestine
  • 276pancreas
  • 257heart
  • 244limb
  • 214embryo
  • 203skin of body
  • 171large intestine
  • 161liver
  • 146extraembryonic component
  • 118stomach
  • 109eye
  • 98adipose tissue
  • 89bone element
  • 86mammary gland
  • 83small intestine
  • 83uterus
  • 79artery
  • 78prostate gland
  • 73adrenal gland
  • 73placenta
  • 64penis
  • 64ureter
  • 62lymph node
  • 50gonad
  • 49thymus
  • 45esophagus
  • 43spinal cord
  • 34spleen
  • 26testis
  • 25nerve
  • 24lymphatic vessel
  • 24lymphoid tissue
  • 23ovary
  • 23thyroid gland
  • 19mouth
  • 18skeleton
  • 16bronchus
  • 13bone marrow
  • 13breast
  • 13pituitary gland
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 9892AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 6937hg19
  • 1909GRCh38
  • 4hg18
biosample_term_name!!
  • GM12878
lab.title!
  • Stephen Parker, UMich
BIOSAMPLE
TYPE

10603 results

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Clear Filters
binding sites
candidate regulatory elements
accessible chromatin
chromatin state
histone modifications
target gene predictions
tissue
whole blood2635
heart37201215
stomach40211193
kidney291421610
brain29163182
primary cell
monocyte28618
common myeloid progenitor, CD34-positive271413
CD8-positive, alpha-beta T cell753014
B cell171086
endothelial cell37114
cell line
HeLa-S35553
A54921191181
H1-hESC139111
K562723161
MCF-796251
in vitro differentiated cells
neural progenitor cell5515410
hematopoietic multipotent progenitor cell19101101
adipocyte46124
embryonic stem cell1156
cardiomyocytes
stem cell
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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