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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 93target gene predictions
  • 67candidate regulatory elements
  • 35chromatin state
  • 9accessible chromatin
  • 5binding sites
  • 4histone modifications
  • 2eQTL
  • 2gene expression
Date released
  • 95September, 2022
  • 51July, 2026
  • 43February, 2021
  • 6June, 2020
  • 6November, 2021
  • 4May, 2021
  • 3August, 2017
  • 3February, 2024
  • 2January, 2022
  • 2March, 2024
  • 1March, 2020
  • 1October, 2022
Available data
  • 183bed bed3+
  • 32bed bed9
  • 3bigWig
  • 2tsv
Organism
  • 217Homo sapiens
Collection Tags
  • 96EpiMap
  • 51ENCODE-rE2G
  • 36ENCODE
  • 14ChIP-Atlas
  • 6AMP
  • 6T2DKP
  • 5DGA
  • 24DN
  • 2GTEx
  • 2T1D
  • 2T2D
  • 2eQTLCatalogue
Biosample type
  • 162tissue
  • 49cell line
  • 6primary cell
Organ
  • 3365blood
  • 2902vasculature
  • 2861blood vessel
  • 2853bodily fluid
  • 2659vein
  • 952epithelium
  • 903brain
  • 756kidney
  • 518connective tissue
  • 488heart
  • 440lung
  • 386musculature of body
  • 349intestine
  • 319pancreas
  • 296skin of body
  • 244limb
  • 240liver
  • 217large intestine
  • 215embryo
  • 174extraembryonic component
  • 161eye
  • 142adipose tissue
  • 140stomach
  • 111muscle organ
  • 106bone element
  • 104mammary gland
  • 102adrenal gland
  • 97placenta
  • 97small intestine
  • 93thymus
  • 93uterus
  • 88artery
  • 87prostate gland
  • 73ureter
  • 64gonad
  • 64penis
  • 63spleen
  • 62lymph node
  • 60__MARKER__
  • 49spinal cord
  • 48esophagus
  • 47thyroid gland
  • 32ovary
  • 31testis
  • 25nerve
  • 24lymphoid tissue
  • 24skeleton
  • 21lymphatic vessel
  • 21mouth
  • 16bronchus
  • 15breast
  • 13bone marrow
  • 13pituitary gland
  • 13urinary bladder
  • 12tongue
  • 12vagina
  • 5trachea
  • 4nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 211AMP
  • 6ENCODE
Genome assembly (visualization)
  • 162hg19
  • 93GRCh38
biosample_term_name!
  • HT-29
BIOSAMPLE
TYPE

217 results

search-icontable-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine28271311
sigmoid colon101051
transverse colon98411
colonic mucosa4431
mucosa of rectum243
cell line
HCT1161921
SW480221111
RKO11111
Caco-231
HCT-116 cell112
primary cell
colon epithelial cell33
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