Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 25gene expression
  • 24candidate regulatory elements
  • 23accessible chromatin
  • 20target gene predictions
  • 16chromatin state
  • 13histone modifications
  • 12binding sites
  • 10eQTL
  • 5differential activity
  • 4Fine-mapped variants
  • 4variant allelic effects
  • 1caQTL
Date released
  • 43September, 2022
  • 29February, 2024
  • 24February, 2021
  • 10August, 2021
  • 10March, 2020
  • 5March, 2025
  • 5November, 2021
  • 4June, 2020
  • 4March, 2023
  • 3August, 2017
  • 3January, 2020
  • 3May, 2020
  • 3May, 2021
  • 2February, 2020
  • 2May, 2022
  • 2May, 2024
  • 1January, 2022
  • 1July, 2020
  • 1November, 2019
  • 1October, 2022
  • 1September, 2018
Available data
  • 103bed bed3+
  • 33tsv
  • 23bigWig
  • 13bed bed9
  • 3csv
  • 1bam
  • 1bigBed bed9
Organism
  • 157Homo sapiens
Collection Tags
  • 47DGA
  • 39EpiMap
  • 34AMP
  • 18T2DKP
  • 14 T2DKP
  • 14ChIP-Atlas
  • 11ENCODE
  • 6STARNET
  • 5GTEx
  • 4HPAP
  • 2FNIH_projects-liver
  • 1T1D
  • 1T2D
  • 1eQTLCatalogue
Biosample type
  • 65primary cell
  • 63tissue
  • 22cell line
  • 7in vitro differentiated cells
Organ
  • 2913vasculature
  • 2859bodily fluid
  • 2848blood
  • 2848blood vessel
  • 2658vein
  • 958epithelium
  • 652kidney
  • 480connective tissue
  • 467brain
  • 380musculature of body
  • 311lung
  • 289intestine
  • 277pancreas
  • 257heart
  • 244limb
  • 215embryo
  • 204skin of body
  • 174large intestine
  • 157liver
  • 146extraembryonic component
  • 119stomach
  • 109eye
  • 99adipose tissue
  • 89bone element
  • 87mammary gland
  • 84small intestine
  • 83uterus
  • 79artery
  • 78prostate gland
  • 73adrenal gland
  • 73placenta
  • 64penis
  • 64ureter
  • 62lymph node
  • 50gonad
  • 49thymus
  • 45esophagus
  • 43spinal cord
  • 34spleen
  • 26testis
  • 25nerve
  • 24lymphatic vessel
  • 24lymphoid tissue
  • 23ovary
  • 23thyroid gland
  • 19mouth
  • 18skeleton
  • 16bronchus
  • 13bone marrow
  • 13breast
  • 13pituitary gland
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 152AMP
  • 5ENCODE
Genome assembly (visualization)
  • 120hg19
  • 61GRCh38
  • 2hg18
biosample_term_name!
  • HuH-7
BIOSAMPLE
TYPE

157 results

search-icontable-tab-icon
Clear Filters
gene expression
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
histone modifications
binding sites
eQTL
differential activity
Fine-mapped variants
variant allelic effects
caQTL
primary cell
hepatocyte132831412
endothelial cell of hepatic sinusoid466
hepatic stellate cell1231111
pancreatic endothelial cell13
Liver fetal (hepatocyte)1
tissue
liver2134109219211
right lobe of liver121113
cell line
HepG2223253
HuH-7.5111
hepatic stellate cell11
in vitro differentiated cells
hepatocyte211
hepatocyte(AFP)3
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego