Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 57accessible chromatin
  • 18candidate regulatory elements
  • 9chromatin state
  • 9target gene predictions
  • 6binding sites
  • 4histone modifications
  • 2variant allelic effects
  • 1eQTL
  • 1gene expression
Date released
  • 27September, 2022
  • 24February, 2023
  • 22November, 2022
  • 17February, 2021
  • 6June, 2020
  • 2February, 2020
  • 2January, 2020
  • 2May, 2020
  • 2November, 2021
  • 2October, 2022
  • 1February, 2024
Available data
  • 97bed bed3+
  • 34bigWig
  • 9bed bed9
  • 2tsv
Organism
  • 107Homo sapiens
Collection Tags
  • 47CMDGA
  • 27EpiMap
  • 14ChIP-Atlas
  • 11ENCODE
  • 2AMP
  • 2DGA
  • 2T2DKP
  • 1GTEx
Biosample type
  • 70tissue
  • 21primary cell
  • 10cell line
  • 6in vitro differentiated cells
Organ
  • 2913vasculature
  • 2859bodily fluid
  • 2848blood
  • 2848blood vessel
  • 2658vein
  • 958epithelium
  • 652kidney
  • 480connective tissue
  • 467brain
  • 380musculature of body
  • 311lung
  • 289intestine
  • 277pancreas
  • 257heart
  • 244limb
  • 215embryo
  • 204skin of body
  • 174large intestine
  • 163liver
  • 146extraembryonic component
  • 119stomach
  • 107eye
  • 99adipose tissue
  • 89bone element
  • 87mammary gland
  • 84small intestine
  • 83uterus
  • 79artery
  • 78prostate gland
  • 73adrenal gland
  • 73placenta
  • 64penis
  • 64ureter
  • 62lymph node
  • 50gonad
  • 49thymus
  • 45esophagus
  • 43spinal cord
  • 34spleen
  • 26testis
  • 25nerve
  • 24lymphatic vessel
  • 24lymphoid tissue
  • 23ovary
  • 23thyroid gland
  • 19mouth
  • 18skeleton
  • 16bronchus
  • 13bone marrow
  • 13breast
  • 13pituitary gland
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 105AMP
  • 2ENCODE
Genome assembly (visualization)
  • 105hg19
  • 14GRCh38
biosample_term_name!
  • Muller cell
BIOSAMPLE
TYPE

107 results

search-icontable-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
chromatin state
target gene predictions
binding sites
histone modifications
variant allelic effects
eQTL
gene expression
tissue
retina2363311111
pigmented layer of retina20
eye1422
corneal epithelium1
primary cell
retinal pigment epithelial cell321121
iris pigment epithelial cell1211
fibroblast of the conjunctiva211
retinal pigment epithelial cell1
retinal bipolar neuron1
cell line
WERI-Rb-1121121
fibroblast of the conjunctiva1
retinal cell1
in vitro differentiated cells
retinal pigment epithelial cell6
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego