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Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
3018
target gene predictions
2638
pQTL
1709
candidate regulatory elements
1235
accessible chromatin
969
histone modifications
943
chromatin state
816
binding sites
685
gene expression
484
differential activity
180
eQTL
141
variant allelic effects
74
Fine-mapped variants
25
caQTL
7
sQTL
5
hQTL
4
variant to gene
3
meQTL
2
other
1
representative DNase hypersensitivity sites
Date released
2636
February, 2025
2581
February, 2021
2511
September, 2022
1984
July, 2026
389
May, 2021
373
February, 2024
333
November, 2021
320
May, 2026
288
June, 2020
286
September, 2023
155
May, 2020
128
August, 2021
128
March, 2020
106
January, 2022
101
October, 2022
89
January, 2020
70
March, 2023
64
February, 2020
56
January, 2021
49
May, 2022
44
November, 2022
40
May, 2024
35
August, 2017
33
July, 2025
32
February, 2023
30
March, 2024
19
April, 2020
November, 2019
14
October, 2019
9
August, 2018
9
May, 2019
8
April, 2019
4
March, 2026
3
November, 2020
3
September, 2018
2
January, 2018
2
January, 2025
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
8045
bed bed3+
3551
tsv
868
bed bed9
534
bigWig
112
txt
39
bigBed bed9
34
bed bed9+
26
csv
16
bigBed narrowPeak
12
bed bed3
12
bed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
12891
Homo sapiens
Collection Tags
2635
UK_Biobank
2499
EpiMap
1838
ChIP-Atlas
1458
ENCODE-rE2G
966
ENCODE
645
DGA
534
AMP
421
T1D
403
T2DKP
393
HDMA
320
pyxis
281
KPMP
219
BLUEPRINT
174
4DN
173
T2DKP
151
GTEx
133
CATlas
111
T2D
101
eQTLCatalogue
100
CMDGA
67
HPAP
26
FNIH_projects-heart
12
FNIH_projects-liver
12
ROADMAP
Biosample type
5941
tissue
3933
primary cell
2548
cell line
512
in vitro differentiated cells
4
stem cell
Organ
3365
blood
2899
vasculature
2858
blood vessel
2853
bodily fluid
2659
vein
951
epithelium
902
brain
756
kidney
518
connective tissue
485
heart
440
lung
386
musculature of body
358
intestine
317
pancreas
296
skin of body
242
limb
239
liver
226
large intestine
215
embryo
174
extraembryonic component
161
eye
142
adipose tissue
140
stomach
111
muscle organ
106
bone element
104
mammary gland
102
adrenal gland
97
placenta
97
small intestine
93
thymus
93
uterus
87
prostate gland
86
artery
73
ureter
64
gonad
64
penis
62
lymph node
62
spleen
60
__MARKER__
49
spinal cord
48
esophagus
47
thyroid gland
32
ovary
31
testis
24
lymphoid tissue
24
nerve
24
skeleton
21
lymphatic vessel
21
mouth
16
bronchus
15
breast
13
bone marrow
13
pituitary gland
13
urinary bladder
12
tongue
12
vagina
5
trachea
4
nose
1
embryonic structure
1
gallbladder
1
pericardium
Project
12224
AMP
333
ENCODE
281
KPMP
60
T1D
19
LungMap
17
community
5
ITG
Genome assembly (visualization)
6978
hg19
3892
GRCh38
4
hg18
Encyclopedia version
1
Adipocyte.narrowpeak.bed.gz Adipocyte.consensus_summit_features.bed.gz
1
Endothelial.narrowpeak.bed.gz Endothelial.consensus_summit_features.bed.gz
1
FAP.narrowpeak.bed.gz Mesenchymal_Stem_Cell.consensus_summit_features.bed.gz
1
Macrophage.narrowpeak.bed.gz Macrophage.consensus_summit_features.bed.gz
1
Neuromuscular_junction.narrowpeak.bed.gz Neuromuscular_junction.consensus_summit_features.bed.gz
1
Neuronal.narrowpeak.bed.gz Neuronal.consensus_summit_features.bed.gz
1
Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
1
Smooth_Muscle.narrowpeak.bed.gz Smooth_Muscle.consensus_summit_features.bed.gz
1
T_cell.narrowpeak.bed.gz T_cell.consensus_summit_features.bed.gz
1
Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
1
Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
1
Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
biosample_term_name!
Rhabdomyosarcoma
month_released!
November, 2019
BIOSAMPLE
TYPE
12939 results
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Clear Filters
caQTL
primary cell
endothelial cell
3
CD4-positive helper T cell
2
macrophage
2
smooth muscle cell
2
T cell
1
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