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Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1114
target gene predictions
812
accessible chromatin
478
gene expression
453
differential activity
362
candidate regulatory elements
210
histone modifications
193
chromatin state
100
binding sites
79
variant allelic effects
53
eQTL
22
caQTL
5
hQTL
5
sQTL
3
meQTL
1
other
Date released
1069
July, 2026
475
September, 2022
456
February, 2021
329
November, 2021
301
May, 2026
281
September, 2023
256
May, 2021
150
February, 2024
86
May, 2020
56
January, 2021
55
March, 2023
53
June, 2020
42
August, 2021
40
May, 2024
39
May, 2022
35
January, 2022
31
July, 2025
31
October, 2022
23
January, 2020
18
April, 2020
16
February, 2020
9
August, 2018
9
November, 2022
7
October, 2019
6
August, 2017
5
March, 2020
4
February, 2023
3
November, 2020
2
January, 2025
1
July, 2020
1
June, 2021
1
March, 2024
Available data
2720
bed bed3+
611
tsv
405
bigWig
160
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
11
bed bed3
11
bed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
2
csv
Organism
3845
Homo sapiens
Collection Tags
543
ENCODE-rE2G
468
EpiMap
393
HDMA
373
DGA
368
AMP
355
T2DKP
328
T1D
301
pyxis
281
KPMP
216
ChIP-Atlas
211
BLUEPRINT
207
ENCODE
133
CATlas
81
T2DKP
55
HPAP
43
T2D
33
eQTLCatalogue
26
FNIH_projects-heart
15
CMDGA
12
FNIH_projects-liver
12
ROADMAP
6
4DN
1
GTEx
Biosample type
5951
tissue
3890
primary cell
2558
cell line
513
in vitro differentiated cells
4
stem cell
Organ
822
epithelium
466
blood
335
kidney
333
connective tissue
231
brain
198
heart
171
skin of body
169
vasculature
150
pancreas
132
liver
123
blood vessel
78
lung
68
eye
62
musculature of body
56
__MARKER__
50
mammary gland
47
adipose tissue
46
muscle organ
43
extraembryonic component
41
penis
37
artery
36
thymus
25
adrenal gland
24
spleen
23
intestine
23
thyroid gland
22
embryo
20
vein
18
bone element
17
lymphatic vessel
16
bronchus
13
bone marrow
11
esophagus
11
placenta
11
prostate gland
11
stomach
9
bodily fluid
6
large intestine
5
skeleton
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
2
ovary
1
limb
1
pericardium
1
testis
Project
3199
AMP
329
ENCODE
281
KPMP
59
T1D
18
LungMap
4
community
Genome assembly (visualization)
1821
hg19
1814
GRCh38
Encyclopedia version
1
Adipocyte.narrowpeak.bed.gz Adipocyte.consensus_summit_features.bed.gz
1
Endothelial.narrowpeak.bed.gz Endothelial.consensus_summit_features.bed.gz
1
FAP.narrowpeak.bed.gz Mesenchymal_Stem_Cell.consensus_summit_features.bed.gz
1
Macrophage.narrowpeak.bed.gz Macrophage.consensus_summit_features.bed.gz
1
Neuromuscular_junction.narrowpeak.bed.gz Neuromuscular_junction.consensus_summit_features.bed.gz
1
Neuronal.narrowpeak.bed.gz Neuronal.consensus_summit_features.bed.gz
1
Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
1
Smooth_Muscle.narrowpeak.bed.gz Smooth_Muscle.consensus_summit_features.bed.gz
1
Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
1
Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
1
Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
biosample_term_name!
T cell
BIOSAMPLE
TYPE
3890 results
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target gene predictions
accessible chromatin
gene expression
differential activity
candidate regulatory elements
histone modifications
chromatin state
binding sites
variant allelic effects
eQTL
caQTL
hQTL
sQTL
meQTL
other
primary cell
monocyte
2
18
15
4
86
1
4
2
1
1
fibroblast
28
40
10
3
1
6
2
endothelial cell
17
24
9
25
3
1
2
2
2
3
CD8-positive, alpha-beta T cell
27
4
3
7
30
1
macrophage
13
22
2
17
3
3
8
2
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