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Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
2904
target gene predictions
2638
pQTL
1627
candidate regulatory elements
1179
accessible chromatin
898
chromatin state
883
histone modifications
779
binding sites
611
gene expression
484
differential activity
180
eQTL
135
variant allelic effects
74
Fine-mapped variants
25
caQTL
7
sQTL
5
hQTL
4
variant to gene
3
meQTL
3
other
Date released
2636
February, 2025
2400
February, 2021
2400
September, 2022
1937
July, 2026
350
May, 2021
341
February, 2024
333
November, 2021
320
May, 2026
282
September, 2023
268
June, 2020
148
May, 2020
118
March, 2020
103
January, 2022
101
October, 2022
97
August, 2021
86
January, 2020
70
March, 2023
64
February, 2020
56
January, 2021
49
May, 2022
40
May, 2024
33
July, 2025
32
February, 2023
31
August, 2017
30
March, 2024
26
November, 2022
19
April, 2020
12
November, 2019
12
October, 2019
9
August, 2018
9
May, 2019
8
April, 2019
4
March, 2026
3
November, 2020
3
September, 2018
2
January, 2018
2
January, 2025
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
7669
bed bed3+
3476
tsv
827
bed bed9
534
bigWig
112
txt
35
bigBed bed9
34
bed bed9+
16
bigBed narrowPeak
12
bed bed3
12
bed narrowPeak
4
bam
3
bed gappedPeak
3
xls
2
csv
Organism
12391
Homo sapiens
Collection Tags
2635
UK_Biobank
2388
EpiMap
1709
ChIP-Atlas
1411
ENCODE-rE2G
918
ENCODE
598
DGA
437
AMP
421
T1D
402
T2DKP
393
HDMA
320
pyxis
281
KPMP
219
BLUEPRINT
174
4DN
167
T2DKP
151
GTEx
133
CATlas
111
T2D
101
eQTLCatalogue
77
CMDGA
67
HPAP
26
FNIH_projects-heart
12
FNIH_projects-liver
12
ROADMAP
Biosample type
5951
tissue
3933
primary cell
2549
cell line
in vitro differentiated cells
4
stem cell
Organ
3351
blood
2900
vasculature
2860
blood vessel
2853
bodily fluid
2659
vein
926
epithelium
891
brain
754
kidney
482
heart
466
connective tissue
440
lung
384
musculature of body
358
intestine
313
pancreas
287
skin of body
244
limb
232
liver
226
large intestine
185
embryo
169
extraembryonic component
155
eye
140
adipose tissue
140
stomach
109
muscle organ
104
bone element
102
adrenal gland
97
placenta
97
small intestine
93
thymus
93
uterus
91
mammary gland
88
artery
87
prostate gland
73
ureter
64
gonad
63
spleen
62
lymph node
60
__MARKER__
58
penis
49
spinal cord
48
esophagus
47
thyroid gland
32
ovary
31
testis
25
nerve
24
lymphoid tissue
24
skeleton
21
mouth
19
lymphatic vessel
16
bronchus
15
breast
13
bone marrow
13
pituitary gland
13
urinary bladder
12
tongue
12
vagina
5
trachea
1
embryonic structure
1
gallbladder
1
pericardium
Project
11724
AMP
333
ENCODE
281
KPMP
60
T1D
19
LungMap
17
community
5
ITG
Genome assembly (visualization)
6608
hg19
3791
GRCh38
4
hg18
Encyclopedia version
1
Adipocyte.narrowpeak.bed.gz Adipocyte.consensus_summit_features.bed.gz
1
Endothelial.narrowpeak.bed.gz Endothelial.consensus_summit_features.bed.gz
1
FAP.narrowpeak.bed.gz Mesenchymal_Stem_Cell.consensus_summit_features.bed.gz
1
Macrophage.narrowpeak.bed.gz Macrophage.consensus_summit_features.bed.gz
1
Neuromuscular_junction.narrowpeak.bed.gz Neuromuscular_junction.consensus_summit_features.bed.gz
1
Neuronal.narrowpeak.bed.gz Neuronal.consensus_summit_features.bed.gz
1
Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
1
Smooth_Muscle.narrowpeak.bed.gz Smooth_Muscle.consensus_summit_features.bed.gz
1
T_cell.narrowpeak.bed.gz T_cell.consensus_summit_features.bed.gz
1
Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
1
Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
1
Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
biosample_term_name!
T47D
biosample_type!
in vitro differentiated cells
BIOSAMPLE
TYPE
12439 results
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Clear Filters
tissue
whole blood
heart
stomach
kidney
brain
+ See 283 more…
primary cell
monocyte
fibroblast
endothelial cell
CD8-positive, alpha-beta T cell
macrophage
+ See 561 more…
cell line
A549
HeLa-S3
H1-hESC
K562
MCF-7
+ See 771 more…
stem cell
H1-hESC
mesenchymal stem cell
mesendoderm
undifferentiated ESC (H9 cell line)
See all biosamples
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