Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
Date released
Available data
Organism
Collection Tags
Biosample type
Organ
Project
Genome assembly (visualization)
biosample_term_name!
software_used.software.name!
BIOSAMPLE
TYPE

8163 results

search-icontable-tab-icon
Clear Filters
tissue
whole blood2635
heart37
stomach40
kidney29
lung33
brain29
muscle of arm33
small intestine29
adrenal gland28
muscle of leg27
placenta26
large intestine27
muscle of back28
left lung26
liver14
thymus20
right lung22
right kidney20
renal cortex interstitium20
islet of Langerhans
renal pelvis19
left kidney18
spleen15
heart left ventricle11
spinal cord14
adipose tissue7
body of pancreas8
subcutaneous adipose tissue2
sigmoid colon10
tibial nerve6
ovary8
caudate nucleus5
psoas muscle7
coronary artery3
heart right ventricle6
thyroid gland8
transverse colon8
gastrocnemius medialis8
muscle of trunk8
substantia nigra5
chorionic villus8
omental fat pad5
right atrium auricular region3
tibial artery3
ascending aorta4
endocrine pancreas7
pancreas5
retina6
skeletal muscle tissue6
testis7
cerebellum3
frontal cortex2
layer of hippocampus6
Peyer's patch7
aorta4
temporal lobe5
upper lobe of left lung7
left renal cortex interstitium6
putamen2
skeletal muscle1
left cardiac atrium2
left renal pelvis6
right renal cortex interstitium5
right renal pelvis6
Ammon's horn2
angular gyrus4
breast epithelium5
esophagus4
esophagus muscularis mucosa5
esophagus squamous epithelium6
lower leg skin6
thoracic aorta4
vagina4
visceral fat1
chorion membrane3
cingulate gyrus4
colonic mucosa4
duodenal mucosa4
mucosa of rectum4
parathyroid adenoma5
prostate gland4
right lobe of liver2
stomach smooth muscle4
trophoblast4
eye4
muscle layer of colon4
muscle layer of duodenum4
right cardiac atrium2
tongue4
uterus3
gastroesophageal sphincter5
limb3
urinary bladder3
Brodmann (1909) area 462
amygdala
anterior cingulate cortex
aorta wall
blood serum2
cerebellum (Hemisphere)
hypothalamus
nucleus accumbens
skin of body1
subcutaneous abdominal adipose tissue5
C1 segment of cervical spinal cord
artery1
cerebellar cortex2
gastrocnemius medialis(Muscle - Skeletal)
germinal matrix2
globus pallidus2
left ventricle myocardium
medulla oblongata1
midbrain1
middle frontal gyrus2
occipital lobe1
amnion2
bone tissue
cartilage tissue2
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
femur2
internal thoracic artery
mucosa of stomach2
pons1
rectum smooth muscle tissue1
superior temporal gyrus1
umbilical cord2
visceral abdominal adipose tissue
arm bone1
dorsolateral prefrontal cortex
embryonic facial prominence1
germinal center1
inferior parietal cortex1
leg bone1
suprapubic skin3
muscle of leg
blood
chorion2
middle frontal area 462
minor salivary gland
placental basal plate2
tissue
hindlimb muscle
left kidney
omental fat pad
Pancreatic islets
abdominal aorta artery
aortic valve
beige adipocyte
bladder
bladder (urinary bladder)
breast
breast - mammary tissue
cardiac ventricle
cerebellar hemisphere
cerebrospinal fluid1
cervix - ectocervix
cervix - endocervix
colon - sigmoid
colon - transverse
colon sigmoid
cortex
cortex of kidney
diencephalon
esophagus - gastroesophageal junction
esophagus - mucosa
esophagus - muscularis
esophagus mucosa
fallopian tube
forelimb muscle1
gastric (mucosa of stomach)
hindlimb muscle1
kidney - cortex
kidney - medulla
left leg bone1
metanephros
mid-frontal lobe
mitral valve
nephron tubule
parietal lobe
pituitary
pituitary gland
prostate
pulmonary valve
rectal smooth muscle tissue1
renal glomerulus
right arm bone1
skin - not sun exposed (suprapubic)
skin - sun exposed (lower leg)
small intestine - terminal Ileum
synovial joint
thyroid
tricuspid valve
white adipose tissue
primary cell
common myeloid progenitor, CD34-positive27
B cell17
CD4-positive, alpha-beta memory T cell14
CD14-positive monocyte8
endothelial cell3
macrophage3
monocyte
regulatory T cell5
CD8-positive, alpha-beta memory T cell8
T-helper 1 cell6
epithelial cell of proximal tubule2
natural killer cell9
T-helper 17 cell5
hepatocyte2
foreskin keratinocyte11
glomerular endothelial cell2
mononuclear cell7
CD8-positive, alpha-beta T cell7
T cell4
endothelial cell of umbilical vein6
T-helper 2 cell5
fibroblast3
fibroblast of lung6
trophoblast cell7
pericyte cell3
smooth muscle cell2
CD4-positive, alpha-beta T cell8
neurosphere7
neutrophil4
skeletal muscle myoblast4
fibroblast of dermis4
keratinocyte3
foreskin fibroblast6
mammary gland epithelial cell3
naive thymus-derived CD4-positive, alpha-beta T cell4
pancreatic delta cell
dermis blood vessel endothelial cell6
fibroblast of cardiac tissue3
pancreatic acinar cell
pancreatic alpha cell
pancreatic beta cell
pancreatic ductal cell
skeletal muscle satellite cell2
epithelial cell of prostate4
glomerular visceral epithelial cell2
naive T cell3
astrocyte2
bronchial epithelial cell4
fibroblast of breast4
kidney tubule cell3
myoepithelial cell of mammary gland4
naive thymus-derived CD8-positive, alpha-beta T cell
osteoblast2
kidney loop of Henle thin ascending limb epithelial cell
mature neutrophil
memory B cell
skin fibroblast2
T-cell4
alternatively activated macrophage
cardiac muscle cell2
choroid plexus epithelial cell2
dermis lymphatic vessel endothelial cell2
epithelial cell of esophagus2
erythroblast
foreskin melanocyte4
gamma-delta T cell
hepatic stellate cell2
kidney epithelial cell2
kidney glomerular epithelial cell2
kidney interstitial cell
mammary epithelial cell3
mast cell3
olfactory receptor cell
pancreatic stellate cell
renal cortical epithelial cell2
Adaptive / Maladaptive / Repairing Fibroblast
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
Afferent / Efferent Arteriole Endothelial Cell
B Cell
CD14-positive, CD16-negative classical monocyte
CD4-positive helper T cell
Classical Dendritic Cell
Connecting Tubule Cell
Connecting Tubule Intercalated Cell Type A
Connecting Tubule Principal Cell
Cortical Thick Ascending Limb Cell
Cycling Endothelial Cell
Cycling Epithelial Cell
Cycling T Cell
Cytotoxic T Cell
Degenerative Connecting Tubule Cell
Degenerative Connecting Tubule Cell / Principal Cell
Degenerative Cortical Thick Ascending Limb Cell
Degenerative Distal Convoluted Tubule Cell
Degenerative Intercalated Cell Type A
Degenerative Peritubular Capillary Endothelial Cell
Degenerative Principal Cell
Degenerative Proximal Tubule Epithelial Cell
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
Degenerative Vascular Smooth Muscle Cell
Descending Thin Limb Cell Type 1
Distal Convoluted Tubule Cell Type 1
Fibroblast
Glomerular Capillary Endothelial Cell
Intercalated Cell Type A
Intercalated Cell Type B
Lymphatic Endothelial Cell
M2 Macrophage
Medullary Thick Ascending Limb Cell
Mesangial Cell
Monocyte
Monocyte-derived Cell
Myofibroblast
Natural Killer T Cell
Natural Killer T Cell Type 1
Natural Killer T Cell Type 2
Non-Classical Monocyte
Parietal Epithelial Cell
Peritubular Capillary Endothelial Cell
Plasma Cell
Plasmacytoid Dendritic Cell
Podocyte
Principal Cell
Proximal Tubule Epithelial Cell Segment 1 and 2
Proximal Tubule Epithelial Cell Segment 3
Regulatory T Cell
Renin-positive Juxtaglomerular Granular Cell
T Cell
T follicular helper cell
Transitional Principal-Intercalated Cell
Vascular Smooth Muscle Cell / Pericyte
adipocyte2
astrocyte of the cerebellum2
astrocyte of the hippocampus2
central memory CD8-positive, alpha-beta T cell
effector memory CD8-positive, alpha-beta T cell
endothelial cell of lymphatic vessel3
fibroblast of mammary gland2
fibroblast of pulmonary artery2
fibroblast of the aortic adventitia2
fibroblast of villous mesenchyme2
inflammatory macrophage
kidney cortex collecting duct principal cell
kidney loop of Henle thick ascending limb epithelial cell
luminal epithelial cell of mammary gland1
lung microvascular endothelial cell3
mesangial cell
mesenchymal stem cell1
myofibroblast cell1
naive B cell
retinal pigment epithelial cell2
skeletal muscle cell2
smooth muscle cell of the brain vasculature2
CD1c-positive myeloid dendritic cell2
adult endothelial progenitor cell
articular chondrocyte
astrocyte of the spinal cord2
basal cell
brain microvascular endothelial cell2
cardiac fibroblast3
effector CD4-positive, alpha-beta T cell
effector T cell
endothelial cell of hepatic sinusoid
fibroblast of gingiva2
fibroblast of peridontal ligament2
fibroblast of the conjunctiva2
iris pigment epithelial cell2
kidney capillary endothelial cell1
kidney connecting tubule epithelial cell
kidney distal convoluted tubule epithelial cell
mature natural killer cell
memory T cell
memory regulatory T cell
nephron progenitor
non-pigmented ciliary epithelial cell2
pancreatic MUC5B+ductal cell
pancreatic alpha+beta cell
pancreatic cycling alpha cell
pancreatic endothelial cell
pancreatic gamma+epsilon cell
pancreatic macrophage cell
pancreatic mast cell
pancreatic polypeptide-secreting cell
peripheral blood mononuclear cell4
pulmonary artery endothelial cell2
skeletal muscle fiber
stromal cell of bone marrow2
type I muscle cell
type II muscle cell
type II pneumocyte
vascular associated smooth muscle cell
Cycling Mononuclear Phagocyte
Mast Cell
S-shaped body
Schwann cell
activated CD4-positive, alpha-beta T cell
amnion mesenchymal stem cell1
amniotic stem cell1
blood cell
colon epithelial cell
cortical cell of adrenal gland
endocardial cell2
enterocyte
epidermal melanocyte1
epithelial cell of amnion1
foam cell
kidney cell
kidney collecting duct intercalated cell
kidney cortex collecting duct intercalated cell
kidney inner medulla collecting duct principal cell
kidney loop of Henle descending limb epithelial cell
kidney resident macrophage
mammary stem cell1
naive B cel
naive regulatory T cell
pancreatic A cell
pancreatic quiescent stellate cell
plasma cell
regular cardiac myocyte1
smooth muscle cell of the coronary artery
type B pancreatic cell
cardiac fibroblast
CD4-positive, CD25-positive, alpha-beta regulatory T cell1
Kupffer cell
activated CD8-positive, alpha-beta T cell
blood vessel smooth muscle cell
brain pericyte1
capillary endothelial cell
ciliated cell
club cell
dendritic cell1
dermis microvascular lymphatic vessel endothelial cell2
effector memory CD4-positive, alpha-beta T cell1
enteric smooth muscle cell
erythrocyte1
extracellular matrix secreting cell
fat cell
fibro-adipogenic progenitor cell
gabaergic neuron
glutamatergic neuron
goblet cell
kidney inner medulla collecting duct intercalated cell
leukocyte
megakaryocyte
mesothelial cell
microglial cell
myeloid dendritic cell
naive t cell
neural cell
neuromuscular junction nucleus
neuronal stem cell2
parietal cell
peptic cell
plasmacytoid dendritic cell
regular ventricular cardiac myocyte2
renal vesicle
smooth muscle cell of the esophagus
thyroid follicular cell
type 1 muscle cell
type 2a muscle cell
type 2x muscle cell
type I pneumocyte
brain microvascular endothelial cell
retinal pigment epithelial cell
B cell, CD19-positive
B-1 B cell
B-1a B cell
B-2 B cell
CD34-PB
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
CD56-positive, CD161-positive immature natural killer cell
Heart fetal (cardiac muscle cell)
Leydig cell
Liver fetal (hepatocyte)
Satellite Cells, Skeletal Muscle
activated pancreatic stellate cell
alpha-beta T cell
alveolar macrophage
amniotic epithelial cell1
aortic adventitial fibroblast
basal cell of epidermis
bronchial goblet cell
cardiac atrium fibroblast
cardiac endothelial cell
cardiac ventricle fibroblast
cell
cells - cultured fibroblasts
central memory CD4-positive, alpha-beta T cell
cholangiocyte
colon goblet cell
conventional dendritic cell
cytotoxic T cell
eccrine cell
effector CD8-positive, alpha-beta T cell
embryonic stem cell
endothelial cell of artery
endothelial cell of coronary artery
enteric neuron
enterochromaffin-like cell
enterocyte of epithelium of small intestine
epithelial cell of distal tubule
erythroid lineage cell
fibroblast of arm
fibroblast of skin of abdomen1
fibroblast of skin of back1
fibroblast of skin of right quadriceps1
foveolar cell of stomach
glial cell
granular cell of epidermis
granulosa cell
helper T cell
immature natural killer cell
intestinal tuft cell
kidney granular cell
kidney inner medulla collecting duct epithelial cell
kidney interstitial fibroblast
kidney loop of Henle ascending limb epithelial cell
kidney loop of Henle thin descending limb epithelial cell
luminal epithelial cell of prostatic duct
luteal cell
lymphocyte of B lineage
mature B cell
mature NK T cell
mature eosinophil
megakaryocyte-erythroid progenitor cell
melanocyte
mesenchymal cell
mesenchymal stem cell of adipose
meso-epithelial cell
myoepithelial cell
myotube
natural killer cell mediated cytotoxicity
neuroendocrine cell
non keratinizing barrier epithelial cell
non-classical monocyte
oligodendrocyte
oligodendrocyte precursor cell
pancreatic cell
pancreatic endocrine cell
pancreatic epsilon cell
paneth cell
pericardium fibroblast
progenitor cell
proximal tubule
quiescent pancreatic stellate cell
regular atrial cardiac myocyte
renal alpha-intercalated cell
renal beta-intercalated cell
renal connecting tubule
renal epithelial cell
renal principal cell
respiratory goblet cell
schwann cell
sensory neuron
skeletal muscle fibroblast
small intestine goblet cell
stellate neuron
stomach neuroendocrine cell
stromal cell
type I cell of adrenal cortex
type II cell of adrenal cortex
ureteric bud
uterine smooth muscle cell
ventricular cardiac muscle cell
cell line
HeLa-S35
A54921
H1-hESC1
K5627
MCF-79
HFFc6
H97
EndoC_BH1
GM128782
SK-N-SH4
pituitary stalk
HepG22
endometrium adenocarcinoma3
immortal human breast epithelial cell line cell3
lymphocyte1
22Rv14
SK-N-DZ4
induced pluripotent stem cell
LNCaP clone FGC3
T47D3
WI385
HCT1162
HEK2933
IMR-902
NAMALWA cell2
iPSC derived cell line
lymphoblastoid cell line
A6732
GM069902
GM087142
GM128642
GM128652
GM128752
GM192381
GM192391
GM192401
HAP-12
HL-602
HT-292
KARPAS-422 cell1
MM.1S2
NB42
OCI-LY72
PC-92
Panc12
SK-N-MC2
WERI-Rb-12
iPS DF 19.112
A1722
ACC1122
ACHN2
AG04449 cell1
AG04450 cell1
AG09309 cell1
AG09319 cell1
AG10803 cell1
BE(2)-C1
BJ cell1
C4-2B2
CMK2
Caco-2 cell1
Caki22
CyT49
DND-412
DOHH22
Daoy2
EH2
EL2
ELF-12
ELR2
G4012
GM045032
GM045042
GM102482
GM102662
GM128911
GM128921
GM185071
GM232482
GM233382
H42
H542
H7-hESC1
HS-27A2
HS-52
HT10802
HUES482
HUES62
HUES642
HUES8
KBM-72
KMS-112
KOPT-K12
L1-S82
LHCN-M22
LoVo cell1
Loucy2
M059J2
MG632
NCI-H9292
NT2-D1 cell1
OCI-LY12
OCI-LY32
PC-32
RCC 78602
RPMI79512
RPMI82262
RWPE12
RWPE22
SJCRH302
SJSA12
SK-MEL-52
SU-DHL-62
SW4802
UCSF-42
iPS DF 19.72
iPS DF 6.92
iPS-11a2
iPS-15b2
iPS-18a2
iPS-18c2
iPS-20b2
8988T1
AG08395 cell1
AG08396 cell1
AG204431
COLO8291
CWRU11
ES-I31
GM033481
HEK293T1
HK-2 cell1
HPDE6-E6E71
HTR-8/Svneo1
HuH-71
HuH-7.51
L1-S8R1
LNCAP2
MCF 10A3
NCI-H226 cell1
NCI-H460 cell1
VCaP cell1
colon carcinoma1
colon epithelial cell1
foreskin fibroblast1
iPS DF 4.7 Cell Line1
iPS-NIHi111
iPS-NIHi71
medulloblastoma1
renal cell carcinoma1
urothelium cell line1
AG108032
BJAB cell
ESC derived cell line
GM128011
GM128731
GM128741
GM18505
GM19099
GM19193
HCT-116 cell
HFF-Myc1
Jurkat
MCF 10A cell
MIN6
NAMALWA2
THP-1
U937
muscle
AG044491
AG044501
AG093091
AG093191
B-lymphoblastoid cell line
BE2C1
BJ1
BL-2 cell
Caco-21
D721Med1
DG-75 cell
DND-41 cell
ECC-1
GM10847
GM12872
GM139761
GM139771
GM15510
GM18486
GM18508
GM18516
GM18522
GM18526
GM18951
GM19141
GM19204
GM200001
H11
H71
HAC cell
HBMEC cell
HCEC 1CT1
HEK293-T-REx cell
HGPS cell
HK-21
Ishikawa1
JVM-2 cell
Jurkat, Clone E6-11
Karpas-4221
LoVo1
MCF10A-Er-Src cell
MDA-MB-231 cell
NCCIT cell
NCI-H2261
NCI-H4601
NHEK
NT2/D11
Normal Human Astrocytes
PANC-1 cell
PFSK-1 cell
RCC1
RCC 7860 HIF1a re-expression
RCC 7860 HIF2a over-expression
RCC 7860 vector
RKO1
Raji cell
SAEC
SH-SY5Y cell
SK-N-SH_RA
SUDHL5
T-47D cell
U-266 cell
U-87 MG
U2OS
VCaP1
WI-38 cell
Z-138
cells - EBV-transformed lymphocytes
esophageal epithelial cell
fibroblast cell line
glioblastoma cell
glomerular visceral epithelial cell
iPS DF 4.71
macrophage
monocyte
smooth muscle cell of the coronary artery
spinal cord
in vitro differentiated cells
hematopoietic multipotent progenitor cell19
neural progenitor cell5
adipocyte4
cardiomyocytes
extended pluripotent stem (EPS) cells
induced pluripotent stem cell
progenitor cell of endocrine pancreas
cardiomyocytes (cardiac muscle cell)
endodermal cell4
mesenchymal stem cell3
cardiac muscle cell4
cardiac precursors (cardiac muscle cell)
dendritic cell
embryonic stem cell
mesodermal cell4
muscle cell2
bipolar neuron2
mesendoderm2
neural cell3
smooth muscle cell2
trophoblast cell2
ectodermal cell2
hepatocyte2
islet precursor cell2
neuron2
cardiac mesoderm primordium1
hepatocyte(AFP)
neuronal stem cell2
olfactory neurosphere cell line1
pancreatic ductal cell
Pancreatic progenitors (progenitor cell of endocrine pancreas)
cardiac myoblast2
cardiovascular progenitor cell2
lymphocyte of B lineage (iPSC)
myocyte1
myotube1
neuroepithelial stem cell2
Adipose SGBS cell line (adipocyte)
ESC dervived hypothalamic neuron (arcuate nucleus)
ESC dervived hypothalamic progenitor (arcuate nucleus)
Human Mesenchymal Cell derived Adipocytes
Human Mesenchymal Cell derived Osteoblasts
Preadipose SGBS cell line (adipocyte)
cardiac fibroblast
cardiac muscle cell (pacemaker cell)
ecto neural progenitor cell1
endothelial cell
excitatory neuron
hippocampal neuron
intermediate cardiomyocytes
intermediate endothelial cell
intermediate smooth muscle cell
lower motor neuron
mesodermal cell (lineage marker-negative)
mesodermal cell (pacemaker intermediate)
mid-neurogenesis radial glial cells1
radial glial cell1
skeletal muscle myoblast
stem cell
white adipose cell
stem cell
H1-hESC
mesenchymal stem cell
mesendoderm
undifferentiated ESC (H9 cell line)