Annotation Matrix

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Date released
Available data
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Collection Tags
Biosample type
Organ
Project
Genome assembly (visualization)
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BIOSAMPLE
TYPE

8164 results

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tissue
whole blood2635
heart
stomach
kidney
lung
brain
muscle of arm
small intestine
adrenal gland
muscle of leg
placenta
large intestine
muscle of back
left lung
liver
thymus
right lung
right kidney
renal cortex interstitium
islet of Langerhans
renal pelvis
left kidney
spleen
heart left ventricle
spinal cord
adipose tissue
body of pancreas
subcutaneous adipose tissue
sigmoid colon
tibial nerve
ovary
caudate nucleus
psoas muscle
coronary artery
heart right ventricle
thyroid gland
transverse colon
gastrocnemius medialis
muscle of trunk
substantia nigra
chorionic villus
omental fat pad
right atrium auricular region
tibial artery
ascending aorta
endocrine pancreas
pancreas
retina
skeletal muscle tissue
testis
cerebellum
frontal cortex
layer of hippocampus
Peyer's patch
aorta
temporal lobe
upper lobe of left lung
left renal cortex interstitium
putamen
skeletal muscle
left cardiac atrium
left renal pelvis
right renal cortex interstitium
right renal pelvis
Ammon's horn
angular gyrus
breast epithelium
esophagus
esophagus muscularis mucosa
esophagus squamous epithelium
lower leg skin
thoracic aorta
vagina
visceral fat
chorion membrane
cingulate gyrus
colonic mucosa
duodenal mucosa
mucosa of rectum
parathyroid adenoma
prostate gland
right lobe of liver
stomach smooth muscle
trophoblast
eye
muscle layer of colon
muscle layer of duodenum
right cardiac atrium
tongue
uterus
gastroesophageal sphincter
limb
urinary bladder
Brodmann (1909) area 46
amygdala
anterior cingulate cortex
aorta wall
blood serum2
cerebellum (Hemisphere)
hypothalamus
nucleus accumbens
skin of body
subcutaneous abdominal adipose tissue
C1 segment of cervical spinal cord
artery
cerebellar cortex
gastrocnemius medialis(Muscle - Skeletal)
germinal matrix
globus pallidus
left ventricle myocardium
medulla oblongata
midbrain
middle frontal gyrus
occipital lobe
amnion
bone tissue
cartilage tissue2
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
femur
internal thoracic artery
mucosa of stomach
pons
rectum smooth muscle tissue
superior temporal gyrus
umbilical cord
visceral abdominal adipose tissue
arm bone
dorsolateral prefrontal cortex
embryonic facial prominence
germinal center
inferior parietal cortex
leg bone
suprapubic skin
muscle of leg
blood
chorion
middle frontal area 46
minor salivary gland
placental basal plate
tissue
hindlimb muscle
left kidney
omental fat pad
Pancreatic islets
abdominal aorta artery
aortic valve
beige adipocyte
bladder
bladder (urinary bladder)
breast
breast - mammary tissue
cardiac ventricle
cerebellar hemisphere
cerebrospinal fluid1
cervix - ectocervix
cervix - endocervix
colon - sigmoid
colon - transverse
cortex
cortex of kidney
diencephalon
esophagus - gastroesophageal junction
esophagus - mucosa
esophagus - muscularis
esophagus mucosa
fallopian tube
forelimb muscle
gastric (mucosa of stomach)
hindlimb muscle
kidney - cortex
kidney - medulla
left leg bone
metanephros
mid-frontal lobe
mitral valve
nephron tubule
parietal lobe
pituitary
pituitary gland
prostate
pulmonary valve
rectal smooth muscle tissue
renal glomerulus
right arm bone
skin - not sun exposed (suprapubic)
skin - sun exposed (lower leg)
small intestine - terminal Ileum
synovial joint
thyroid
tricuspid valve
white adipose tissue
primary cell
common myeloid progenitor, CD34-positive
B cell
CD4-positive, alpha-beta memory T cell
CD14-positive monocyte
endothelial cell
macrophage
monocyte
regulatory T cell
CD8-positive, alpha-beta memory T cell
T-helper 1 cell
epithelial cell of proximal tubule
natural killer cell
T-helper 17 cell
hepatocyte
foreskin keratinocyte
glomerular endothelial cell
mononuclear cell
CD8-positive, alpha-beta T cell
T cell
endothelial cell of umbilical vein
T-helper 2 cell
fibroblast
fibroblast of lung
trophoblast cell
pericyte cell
smooth muscle cell
CD4-positive, alpha-beta T cell
neurosphere
neutrophil
skeletal muscle myoblast
fibroblast of dermis
keratinocyte
foreskin fibroblast
mammary gland epithelial cell
naive thymus-derived CD4-positive, alpha-beta T cell
pancreatic delta cell
dermis blood vessel endothelial cell
fibroblast of cardiac tissue
pancreatic acinar cell
pancreatic alpha cell
pancreatic beta cell
pancreatic ductal cell
skeletal muscle satellite cell
epithelial cell of prostate
glomerular visceral epithelial cell
naive T cell
astrocyte
bronchial epithelial cell
fibroblast of breast
kidney tubule cell
myoepithelial cell of mammary gland
naive thymus-derived CD8-positive, alpha-beta T cell
osteoblast
kidney loop of Henle thin ascending limb epithelial cell
mature neutrophil
memory B cell
skin fibroblast
T-cell
alternatively activated macrophage
cardiac muscle cell
choroid plexus epithelial cell
dermis lymphatic vessel endothelial cell
epithelial cell of esophagus
erythroblast
foreskin melanocyte
gamma-delta T cell
hepatic stellate cell
kidney epithelial cell
kidney glomerular epithelial cell
kidney interstitial cell
mammary epithelial cell
mast cell
olfactory receptor cell
pancreatic stellate cell
renal cortical epithelial cell
Adaptive / Maladaptive / Repairing Fibroblast
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
Afferent / Efferent Arteriole Endothelial Cell
B Cell
CD14-positive, CD16-negative classical monocyte
CD4-positive helper T cell
Classical Dendritic Cell
Connecting Tubule Cell
Connecting Tubule Intercalated Cell Type A
Connecting Tubule Principal Cell
Cortical Thick Ascending Limb Cell
Cycling Endothelial Cell
Cycling Epithelial Cell
Cycling T Cell
Cytotoxic T Cell
Degenerative Connecting Tubule Cell
Degenerative Connecting Tubule Cell / Principal Cell
Degenerative Cortical Thick Ascending Limb Cell
Degenerative Distal Convoluted Tubule Cell
Degenerative Intercalated Cell Type A
Degenerative Peritubular Capillary Endothelial Cell
Degenerative Principal Cell
Degenerative Proximal Tubule Epithelial Cell
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
Degenerative Vascular Smooth Muscle Cell
Descending Thin Limb Cell Type 1
Distal Convoluted Tubule Cell Type 1
Fibroblast
Glomerular Capillary Endothelial Cell
Intercalated Cell Type A
Intercalated Cell Type B
Lymphatic Endothelial Cell
M2 Macrophage
Medullary Thick Ascending Limb Cell
Mesangial Cell
Monocyte
Monocyte-derived Cell
Myofibroblast
Natural Killer T Cell
Natural Killer T Cell Type 1
Natural Killer T Cell Type 2
Non-Classical Monocyte
Parietal Epithelial Cell
Peritubular Capillary Endothelial Cell
Plasma Cell
Plasmacytoid Dendritic Cell
Podocyte
Principal Cell
Proximal Tubule Epithelial Cell Segment 1 and 2
Proximal Tubule Epithelial Cell Segment 3
Regulatory T Cell
Renin-positive Juxtaglomerular Granular Cell
T Cell
T follicular helper cell
Transitional Principal-Intercalated Cell
Vascular Smooth Muscle Cell / Pericyte
adipocyte
astrocyte of the cerebellum
astrocyte of the hippocampus
central memory CD8-positive, alpha-beta T cell
effector memory CD8-positive, alpha-beta T cell
endothelial cell of lymphatic vessel
fibroblast of mammary gland
fibroblast of pulmonary artery
fibroblast of the aortic adventitia
fibroblast of villous mesenchyme
inflammatory macrophage
kidney cortex collecting duct principal cell
kidney loop of Henle thick ascending limb epithelial cell
luminal epithelial cell of mammary gland
lung microvascular endothelial cell
mesangial cell
mesenchymal stem cell
myofibroblast cell
naive B cell
retinal pigment epithelial cell
skeletal muscle cell
smooth muscle cell of the brain vasculature
CD1c-positive myeloid dendritic cell
adult endothelial progenitor cell
articular chondrocyte
astrocyte of the spinal cord
basal cell
brain microvascular endothelial cell
cardiac fibroblast
effector CD4-positive, alpha-beta T cell
effector T cell
endothelial cell of hepatic sinusoid
fibroblast of gingiva
fibroblast of peridontal ligament
fibroblast of the conjunctiva
iris pigment epithelial cell
kidney capillary endothelial cell
kidney connecting tubule epithelial cell
kidney distal convoluted tubule epithelial cell
mature natural killer cell
memory T cell
memory regulatory T cell
nephron progenitor
non-pigmented ciliary epithelial cell
pancreatic MUC5B+ductal cell
pancreatic alpha+beta cell
pancreatic cycling alpha cell
pancreatic endothelial cell
pancreatic gamma+epsilon cell
pancreatic macrophage cell
pancreatic mast cell
pancreatic polypeptide-secreting cell
peripheral blood mononuclear cell
pulmonary artery endothelial cell
skeletal muscle fiber
stromal cell of bone marrow
type I muscle cell
type II muscle cell
type II pneumocyte
vascular associated smooth muscle cell
Cycling Mononuclear Phagocyte
Mast Cell
S-shaped body
Schwann cell
activated CD4-positive, alpha-beta T cell
amnion mesenchymal stem cell
amniotic stem cell
blood cell
colon epithelial cell
cortical cell of adrenal gland
endocardial cell
enterocyte
epidermal melanocyte
epithelial cell of amnion
foam cell
kidney cell
kidney collecting duct intercalated cell
kidney cortex collecting duct intercalated cell
kidney inner medulla collecting duct principal cell
kidney loop of Henle descending limb epithelial cell
kidney resident macrophage
mammary stem cell
naive B cel
naive regulatory T cell
pancreatic A cell
pancreatic quiescent stellate cell
plasma cell
regular cardiac myocyte
smooth muscle cell of the coronary artery
type B pancreatic cell
cardiac fibroblast
CD4-positive, CD25-positive, alpha-beta regulatory T cell
Kupffer cell
activated CD8-positive, alpha-beta T cell
blood vessel smooth muscle cell
brain pericyte
capillary endothelial cell
ciliated cell
club cell
dendritic cell
dermis microvascular lymphatic vessel endothelial cell
effector memory CD4-positive, alpha-beta T cell
enteric smooth muscle cell
erythrocyte
extracellular matrix secreting cell
fat cell
fibro-adipogenic progenitor cell
gabaergic neuron
glutamatergic neuron
goblet cell
kidney inner medulla collecting duct intercalated cell
leukocyte
megakaryocyte
mesothelial cell
microglial cell
myeloid dendritic cell
naive t cell
neural cell
neuromuscular junction nucleus
neuronal stem cell
parietal cell
peptic cell
plasmacytoid dendritic cell
regular ventricular cardiac myocyte
renal vesicle
smooth muscle cell of the esophagus
thyroid follicular cell
type 1 muscle cell
type 2a muscle cell
type 2x muscle cell
type I pneumocyte
brain microvascular endothelial cell
retinal pigment epithelial cell
B cell, CD19-positive
B-1 B cell
B-1a B cell
B-2 B cell
CD34-PB
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
CD56-positive, CD161-positive immature natural killer cell
Heart fetal (cardiac muscle cell)
Leydig cell
Liver fetal (hepatocyte)
Satellite Cells, Skeletal Muscle
activated pancreatic stellate cell
alpha-beta T cell
alveolar macrophage
amniotic epithelial cell
aortic adventitial fibroblast
basal cell of epidermis
bronchial goblet cell
cardiac atrium fibroblast
cardiac endothelial cell
cardiac ventricle fibroblast
cell
cells - cultured fibroblasts
central memory CD4-positive, alpha-beta T cell
cholangiocyte
colon goblet cell
conventional dendritic cell
cytotoxic T cell
eccrine cell
effector CD8-positive, alpha-beta T cell
embryonic stem cell
endothelial cell of artery
endothelial cell of coronary artery
enteric neuron
enterochromaffin-like cell
enterocyte of epithelium of small intestine
epithelial cell of distal tubule
erythroid lineage cell
fibroblast of arm
fibroblast of skin of abdomen
fibroblast of skin of back
fibroblast of skin of right quadriceps
foveolar cell of stomach
glial cell
granular cell of epidermis
granulosa cell
helper T cell
immature natural killer cell
intestinal tuft cell
kidney granular cell
kidney inner medulla collecting duct epithelial cell
kidney interstitial fibroblast
kidney loop of Henle ascending limb epithelial cell
kidney loop of Henle thin descending limb epithelial cell
luminal epithelial cell of prostatic duct
luteal cell
lymphocyte of B lineage
mature B cell
mature NK T cell
mature eosinophil
megakaryocyte-erythroid progenitor cell
melanocyte
mesenchymal cell
mesenchymal stem cell of adipose
meso-epithelial cell
myoepithelial cell
myotube
natural killer cell mediated cytotoxicity
neuroendocrine cell
non keratinizing barrier epithelial cell
non-classical monocyte
oligodendrocyte
oligodendrocyte precursor cell
pancreatic cell
pancreatic endocrine cell
pancreatic epsilon cell
paneth cell
pericardium fibroblast
progenitor cell
proximal tubule
quiescent pancreatic stellate cell
regular atrial cardiac myocyte
renal alpha-intercalated cell
renal beta-intercalated cell
renal connecting tubule
renal epithelial cell
renal principal cell
respiratory goblet cell
schwann cell
sensory neuron
skeletal muscle fibroblast
small intestine goblet cell
stellate neuron
stomach neuroendocrine cell
stromal cell
type I cell of adrenal cortex
type II cell of adrenal cortex
ureteric bud
uterine smooth muscle cell
ventricular cardiac muscle cell
cell line
HeLa-S3
A549
H1-hESC
K562
MCF-7
HFFc6
H9
EndoC_BH1
GM12878
SK-N-SH
pituitary stalk
HepG2
endometrium adenocarcinoma
immortal human breast epithelial cell line cell
lymphocyte
22Rv1
SK-N-DZ
induced pluripotent stem cell
LNCaP clone FGC
T47D
WI38
HCT116
HEK293
IMR-90
NAMALWA cell
iPSC derived cell line
lymphoblastoid cell line
A673
GM06990
GM08714
GM12864
GM12865
GM12875
GM19238
GM19239
GM19240
HAP-1
HL-60
HT-29
KARPAS-422 cell
MM.1S
NB4
OCI-LY7
PC-9
Panc1
SK-N-MC
WERI-Rb-1
iPS DF 19.11
A172
ACC112
ACHN
AG04449 cell
AG04450 cell
AG09309 cell
AG09319 cell
AG10803 cell
BE(2)-C
BJ cell
C4-2B
CMK
Caco-2 cell
Caki2
CyT49
DND-41
DOHH2
Daoy
EH
EL
ELF-1
ELR
G401
GM04503
GM04504
GM10248
GM10266
GM12891
GM12892
GM18507
GM23248
GM23338
H4
H54
H7-hESC
HS-27A
HS-5
HT1080
HUES48
HUES6
HUES64
HUES8
KBM-7
KMS-11
KOPT-K1
L1-S8
LHCN-M2
LoVo cell
Loucy
M059J
MG63
NCI-H929
NT2-D1 cell
OCI-LY1
OCI-LY3
PC-3
RCC 7860
RPMI7951
RPMI8226
RWPE1
RWPE2
SJCRH30
SJSA1
SK-MEL-5
SU-DHL-6
SW480
UCSF-4
iPS DF 19.7
iPS DF 6.9
iPS-11a
iPS-15b
iPS-18a
iPS-18c
iPS-20b
8988T
AG08395 cell
AG08396 cell
AG20443
COLO829
CWRU1
ES-I3
GM03348
HEK293T
HK-2 cell
HPDE6-E6E7
HTR-8/Svneo
HuH-7
HuH-7.5
L1-S8R
LNCAP
MCF 10A
NCI-H226 cell
NCI-H460 cell
VCaP cell
colon carcinoma
colon epithelial cell
foreskin fibroblast
iPS DF 4.7 Cell Line
iPS-NIHi11
iPS-NIHi7
medulloblastoma
renal cell carcinoma
urothelium cell line
AG10803
BJAB cell
ESC derived cell line
GM12801
GM12873
GM12874
GM18505
GM19099
GM19193
HCT-116 cell
HFF-Myc
Jurkat
MCF 10A cell
MIN6
NAMALWA
THP-1
U937
muscle
AG04449
AG04450
AG09309
AG09319
B-lymphoblastoid cell line
BE2C
BJ
BL-2 cell
Caco-2
D721Med
DG-75 cell
DND-41 cell
ECC-1
GM10847
GM12872
GM13976
GM13977
GM15510
GM18486
GM18508
GM18516
GM18522
GM18526
GM18951
GM19141
GM19204
GM20000
H1
H7
HAC cell
HBMEC cell
HCEC 1CT
HEK293-T-REx cell
HGPS cell
HK-2
Ishikawa
JVM-2 cell
Jurkat, Clone E6-1
Karpas-422
LoVo
MCF10A-Er-Src cell
MDA-MB-231 cell
NCCIT cell
NCI-H226
NCI-H460
NHEK
NT2/D1
Normal Human Astrocytes
PANC-1 cell
PFSK-1 cell
RCC
RCC 7860 HIF1a re-expression
RCC 7860 HIF2a over-expression
RCC 7860 vector
RKO
Raji cell
SAEC
SH-SY5Y cell
SK-N-SH_RA
SUDHL5
T-47D cell
U-266 cell
U-87 MG
U2OS
VCaP
WI-38 cell
Z-138
cells - EBV-transformed lymphocytes
esophageal epithelial cell
fibroblast cell line
glioblastoma cell
glomerular visceral epithelial cell
iPS DF 4.7
macrophage
monocyte
smooth muscle cell of the coronary artery
spinal cord
in vitro differentiated cells
hematopoietic multipotent progenitor cell
neural progenitor cell
adipocyte
cardiomyocytes
extended pluripotent stem (EPS) cells
induced pluripotent stem cell
progenitor cell of endocrine pancreas
cardiomyocytes (cardiac muscle cell)
endodermal cell
mesenchymal stem cell
cardiac muscle cell
cardiac precursors (cardiac muscle cell)
dendritic cell
embryonic stem cell
mesodermal cell
muscle cell
bipolar neuron
mesendoderm
neural cell
smooth muscle cell
trophoblast cell
ectodermal cell
hepatocyte
islet precursor cell
neuron
cardiac mesoderm primordium
hepatocyte(AFP)
neuronal stem cell
olfactory neurosphere cell line
pancreatic ductal cell
Pancreatic progenitors (progenitor cell of endocrine pancreas)
cardiac myoblast
cardiovascular progenitor cell
lymphocyte of B lineage (iPSC)
myocyte
myotube
neuroepithelial stem cell
Adipose SGBS cell line (adipocyte)
ESC dervived hypothalamic neuron (arcuate nucleus)
ESC dervived hypothalamic progenitor (arcuate nucleus)
Human Mesenchymal Cell derived Adipocytes
Human Mesenchymal Cell derived Osteoblasts
Preadipose SGBS cell line (adipocyte)
cardiac fibroblast
cardiac muscle cell (pacemaker cell)
ecto neural progenitor cell
endothelial cell
excitatory neuron
hippocampal neuron
intermediate cardiomyocytes
intermediate endothelial cell
intermediate smooth muscle cell
lower motor neuron
mesodermal cell (lineage marker-negative)
mesodermal cell (pacemaker intermediate)
mid-neurogenesis radial glial cells
radial glial cell
skeletal muscle myoblast
stem cell
white adipose cell
stem cell
H1-hESC
mesenchymal stem cell
mesendoderm
undifferentiated ESC (H9 cell line)