Annotation Matrix

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Annotation type
Date released
Available data
Organism
Collection Tags
Biosample type
Organ
Project
Genome assembly (visualization)
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software_used.software.name!
BIOSAMPLE
TYPE

8122 results

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tissue
whole blood26351
heart37202132
stomach40211911
kidney291416711
lung33171611
brain291618121
muscle of arm3316161
small intestine2917151
adrenal gland28171411
muscle of leg271415
placenta2615141
large intestine271413
muscle of back281313
left lung261313
liver1310929211
thymus201411
right lung221111
right kidney20101011
renal cortex interstitium20991
islet of Langerhans131113112222
renal pelvis19991
left kidney1899
spleen158611
heart left ventricle1178112
spinal cord14871
adipose tissue786341
body of pancreas8542113
subcutaneous adipose tissue2168214
sigmoid colon1075
tibial nerve6342223
ovary86411
caudate nucleus5341213
psoas muscle784
coronary artery33312231
heart right ventricle65511
thyroid gland8541
transverse colon8541
gastrocnemius medialis854
muscle of trunk854
substantia nigra523133
chorionic villus844
omental fat pad522223
right atrium auricular region3222223
tibial artery3231223
ascending aorta4231113
endocrine pancreas744
pancreas55311
retina633111
skeletal muscle tissue63312
testis73311
cerebellum322223
frontal cortex2222213
layer of hippocampus6341
Peyer's patch733
aorta4441
temporal lobe5251
upper lobe of left lung733
left renal cortex interstitium62211
putamen2111313
left cardiac atrium21611
left renal pelvis6221
right renal cortex interstitium52211
right renal pelvis6221
Ammon's horn221113
angular gyrus424
breast epithelium532
esophagus4321
esophagus muscularis mucosa5221
esophagus squamous epithelium622
lower leg skin622
thoracic aorta4231
vagina42211
chorion membrane333
cingulate gyrus423
colonic mucosa423
duodenal mucosa423
mucosa of rectum423
parathyroid adenoma522
prostate gland4221
right lobe of liver211113
stomach smooth muscle423
trophoblast432
eye422
muscle layer of colon422
muscle layer of duodenum422
right cardiac atrium2231
tongue422
uterus32111
gastroesophageal sphincter511
limb322
skeletal muscle11221
urinary bladder322
Brodmann (1909) area 46222
amygdala123
anterior cingulate cortex123
aorta wall1221
blood serum222
cerebellum (Hemisphere)1113
hypothalamus123
nucleus accumbens123
skin of body1113
subcutaneous abdominal adipose tissue51
C1 segment of cervical spinal cord113
cerebellar cortex2111
gastrocnemius medialis(Muscle - Skeletal)113
germinal matrix212
globus pallidus2111
left ventricle myocardium113
medulla oblongata11111
midbrain11111
middle frontal gyrus2111
occipital lobe11111
visceral fat1211
amnion211
bone tissue4
cartilage tissue22
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))13
femur211
internal thoracic artery121
mucosa of stomach211
pons1111
rectum smooth muscle tissue112
superior temporal gyrus1111
umbilical cord211
visceral abdominal adipose tissue211
arm bone111
dorsolateral prefrontal cortex111
embryonic facial prominence111
germinal center111
inferior parietal cortex111
leg bone111
suprapubic skin3
muscle of leg2
blood2
chorion2
middle frontal area 462
minor salivary gland11
placental basal plate2
tissue2
hindlimb muscle1
left kidney1
omental fat pad1
Pancreatic islets1
abdominal aorta artery1
aortic valve1
beige adipocyte1
bladder1
bladder (urinary bladder)1
breast1
breast - mammary tissue1
cardiac ventricle1
cerebellar hemisphere1
cerebrospinal fluid1
cervix - ectocervix1
cervix - endocervix1
colon - sigmoid1
colon - transverse1
colon sigmoid1
cortex1
cortex of kidney1
diencephalon1
esophagus - gastroesophageal junction1
esophagus - mucosa1
esophagus - muscularis1
esophagus mucosa1
fallopian tube1
forelimb muscle1
gastric (mucosa of stomach)1
hindlimb muscle1
kidney - cortex1
kidney - medulla1
left leg bone1
metanephros1
mid-frontal lobe1
mitral valve1
nephron tubule1
parietal lobe1
pituitary1
pituitary gland1
prostate1
pulmonary valve1
rectal smooth muscle tissue1
renal glomerulus1
right arm bone1
skin - not sun exposed (suprapubic)1
skin - sun exposed (lower leg)1
small intestine - terminal Ileum1
synovial joint1
thyroid1
tricuspid valve1
white adipose tissue1
primary cell
common myeloid progenitor, CD34-positive271413
B cell1710823
CD4-positive, alpha-beta memory T cell1499
CD14-positive monocyte8194
monocyte2154211
endothelial cell379122
macrophage33293111
regulatory T cell543722
CD8-positive, alpha-beta memory T cell877
T-helper 1 cell633712
epithelial cell of proximal tubule2111611
natural killer cell953212
T-helper 17 cell533712
hepatocyte231132
foreskin keratinocyte1144
glomerular endothelial cell211141
mononuclear cell766
CD8-positive, alpha-beta T cell75132
endothelial cell of umbilical vein645111
T cell444221
T-helper 2 cell533312
fibroblast34261
fibroblast of lung6442
trophoblast cell754
pericyte cell31011
CD4-positive, alpha-beta T cell833
neurosphere733
neutrophil432211
skeletal muscle myoblast4231111
smooth muscle cell261121
fibroblast of dermis4431
keratinocyte3531
foreskin fibroblast6212
mammary gland epithelial cell3431
naive thymus-derived CD4-positive, alpha-beta T cell421211
pancreatic delta cell4331
dermis blood vessel endothelial cell622
fibroblast of cardiac tissue343
pancreatic acinar cell3331
pancreatic alpha cell3331
pancreatic beta cell3331
pancreatic ductal cell3331
epithelial cell of prostate432
glomerular visceral epithelial cell2115
naive T cell333
astrocyte2411
bronchial epithelial cell422
fibroblast of breast422
kidney tubule cell3221
myoepithelial cell of mammary gland422
naive thymus-derived CD8-positive, alpha-beta T cell2312
osteoblast22121
skeletal muscle satellite cell2222
kidney loop of Henle thin ascending limb epithelial cell7
mature neutrophil7
memory B cell232
skin fibroblast232
T-cell42
alternatively activated macrophage141
cardiac muscle cell2121
choroid plexus epithelial cell21111
dermis lymphatic vessel endothelial cell222
epithelial cell of esophagus2112
erythroblast222
foreskin melanocyte411
gamma-delta T cell42
hepatic stellate cell21111
kidney epithelial cell21111
kidney glomerular epithelial cell21111
kidney interstitial cell6
mammary epithelial cell3111
mast cell3111
olfactory receptor cell6
pancreatic stellate cell123
renal cortical epithelial cell21111
Adaptive / Maladaptive / Repairing Fibroblast32
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell32
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 132
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 232
Afferent / Efferent Arteriole Endothelial Cell32
B Cell32
CD14-positive, CD16-negative classical monocyte5
CD4-positive helper T cell212
Classical Dendritic Cell32
Connecting Tubule Cell32
Connecting Tubule Intercalated Cell Type A32
Connecting Tubule Principal Cell32
Cortical Thick Ascending Limb Cell32
Cycling Endothelial Cell32
Cycling Epithelial Cell32
Cycling T Cell32
Cytotoxic T Cell32
Degenerative Connecting Tubule Cell32
Degenerative Connecting Tubule Cell / Principal Cell32
Degenerative Cortical Thick Ascending Limb Cell32
Degenerative Distal Convoluted Tubule Cell32
Degenerative Intercalated Cell Type A32
Degenerative Peritubular Capillary Endothelial Cell32
Degenerative Principal Cell32
Degenerative Proximal Tubule Epithelial Cell32
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell32
Degenerative Vascular Smooth Muscle Cell32
Descending Thin Limb Cell Type 132
Distal Convoluted Tubule Cell Type 132
Fibroblast32
Glomerular Capillary Endothelial Cell32
Intercalated Cell Type A32
Intercalated Cell Type B32
Lymphatic Endothelial Cell32
M2 Macrophage32
Medullary Thick Ascending Limb Cell32
Mesangial Cell32
Monocyte32
Monocyte-derived Cell32
Myofibroblast32
Natural Killer T Cell32
Natural Killer T Cell Type 132
Natural Killer T Cell Type 232
Non-Classical Monocyte32
Parietal Epithelial Cell32
Peritubular Capillary Endothelial Cell32
Plasma Cell32
Plasmacytoid Dendritic Cell32
Podocyte32
Principal Cell32
Proximal Tubule Epithelial Cell Segment 1 and 232
Proximal Tubule Epithelial Cell Segment 332
Regulatory T Cell32
Renin-positive Juxtaglomerular Granular Cell32
T Cell32
T follicular helper cell212
Transitional Principal-Intercalated Cell32
Vascular Smooth Muscle Cell / Pericyte32
astrocyte of the cerebellum2111
astrocyte of the hippocampus2111
central memory CD8-positive, alpha-beta T cell32
effector memory CD8-positive, alpha-beta T cell32
endothelial cell of lymphatic vessel311
fibroblast of mammary gland2111
fibroblast of pulmonary artery2111
fibroblast of the aortic adventitia2111
fibroblast of villous mesenchyme2111
inflammatory macrophage131
kidney cortex collecting duct principal cell5
kidney loop of Henle thick ascending limb epithelial cell5
luminal epithelial cell of mammary gland131
lung microvascular endothelial cell311
mesangial cell5
mesenchymal stem cell11111
myofibroblast cell131
naive B cell212
retinal pigment epithelial cell2111
skeletal muscle cell2111
smooth muscle cell of the brain vasculature2111
CD1c-positive myeloid dendritic cell211
adipocyte211
adult endothelial progenitor cell13
articular chondrocyte22
astrocyte of the spinal cord211
basal cell121
brain microvascular endothelial cell211
cardiac fibroblast31
effector CD4-positive, alpha-beta T cell22
effector T cell22
endothelial cell of hepatic sinusoid4
fibroblast of gingiva211
fibroblast of peridontal ligament211
fibroblast of the conjunctiva211
iris pigment epithelial cell211
kidney capillary endothelial cell1111
kidney connecting tubule epithelial cell4
kidney distal convoluted tubule epithelial cell4
mature natural killer cell22
memory T cell22
memory regulatory T cell22
nephron progenitor4
non-pigmented ciliary epithelial cell211
pancreatic MUC5B+ductal cell13
pancreatic alpha+beta cell13
pancreatic cycling alpha cell13
pancreatic endothelial cell13
pancreatic gamma+epsilon cell13
pancreatic macrophage cell13
pancreatic mast cell13
pancreatic polypeptide-secreting cell121
peripheral blood mononuclear cell4
pulmonary artery endothelial cell211
skeletal muscle fiber22
stromal cell of bone marrow211
type I muscle cell1111
type II muscle cell1111
type II pneumocyte211
vascular associated smooth muscle cell22
Cycling Mononuclear Phagocyte3
Mast Cell3
S-shaped body3
Schwann cell12
activated CD4-positive, alpha-beta T cell21
amnion mesenchymal stem cell111
amniotic stem cell111
blood cell3
colon epithelial cell3
cortical cell of adrenal gland21
endocardial cell21
enterocyte3
epidermal melanocyte111
epithelial cell of amnion111
foam cell21
kidney cell3
kidney collecting duct intercalated cell3
kidney cortex collecting duct intercalated cell3
kidney inner medulla collecting duct principal cell3
kidney loop of Henle descending limb epithelial cell3
kidney resident macrophage3
mammary stem cell111
naive B cel21
naive regulatory T cell12
pancreatic A cell3
pancreatic quiescent stellate cell3
plasma cell111
regular cardiac myocyte111
smooth muscle cell of the coronary artery111
type B pancreatic cell3
cardiac fibroblast2
CD4-positive, CD25-positive, alpha-beta regulatory T cell11
Kupffer cell2
activated CD8-positive, alpha-beta T cell11
blood vessel smooth muscle cell2
brain pericyte11
capillary endothelial cell2
ciliated cell11
club cell11
dendritic cell11
dermis microvascular lymphatic vessel endothelial cell2
effector memory CD4-positive, alpha-beta T cell11
enteric smooth muscle cell2
erythrocyte11
extracellular matrix secreting cell 2
fat cell11
gabaergic neuron2
glutamatergic neuron2
goblet cell2
kidney inner medulla collecting duct intercalated cell2
leukocyte2
megakaryocyte2
mesothelial cell11
microglial cell11
myeloid dendritic cell11
naive t cell11
neuronal stem cell2
parietal cell11
peptic cell11
plasmacytoid dendritic cell11
regular ventricular cardiac myocyte2
renal vesicle2
smooth muscle cell of the esophagus2
thyroid follicular cell11
type I pneumocyte11
brain microvascular endothelial cell1
retinal pigment epithelial cell1
B cell, CD19-positive1
B-1 B cell1
B-1a B cell1
B-2 B cell1
CD34-PB1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell1
CD56-positive, CD161-positive immature natural killer cell1
Heart fetal (cardiac muscle cell)1
Leydig cell1
Liver fetal (hepatocyte)1
Satellite Cells, Skeletal Muscle1
activated pancreatic stellate cell1
alpha-beta T cell1
alveolar macrophage1
amniotic epithelial cell1
aortic adventitial fibroblast1
basal cell of epidermis1
bronchial goblet cell1
cardiac atrium fibroblast1
cardiac endothelial cell1
cardiac ventricle fibroblast1
cell1
cells - cultured fibroblasts1
central memory CD4-positive, alpha-beta T cell1
cholangiocyte1
colon goblet cell1
conventional dendritic cell1
cytotoxic T cell1
eccrine cell1
effector CD8-positive, alpha-beta T cell1
embryonic stem cell1
endothelial cell of artery1
endothelial cell of coronary artery1
enteric neuron1
enterochromaffin-like cell1
enterocyte of epithelium of small intestine1
epithelial cell of distal tubule1
erythroid lineage cell1
fibroblast of arm1
fibroblast of skin of abdomen1
fibroblast of skin of back1
fibroblast of skin of right quadriceps1
foveolar cell of stomach1
glial cell1
granular cell of epidermis1
granulosa cell1
helper T cell1
immature natural killer cell1
intestinal tuft cell1
kidney granular cell1
kidney inner medulla collecting duct epithelial cell1
kidney interstitial fibroblast1
kidney loop of Henle ascending limb epithelial cell1
kidney loop of Henle thin descending limb epithelial cell1
luminal epithelial cell of prostatic duct1
luteal cell1
lymphocyte of B lineage1
mature B cell1
mature NK T cell1
mature eosinophil1
megakaryocyte-erythroid progenitor cell1
melanocyte1
mesenchymal cell1
mesenchymal stem cell of adipose1
meso-epithelial cell1
myoepithelial cell1
myotube1
natural killer cell mediated cytotoxicity1
neural cell1
neuroendocrine cell1
non keratinizing barrier epithelial cell1
non-classical monocyte1
oligodendrocyte1
oligodendrocyte precursor cell1
pancreatic cell1
pancreatic endocrine cell1
pancreatic epsilon cell1
paneth cell1
pericardium fibroblast1
progenitor cell1
proximal tubule1
quiescent pancreatic stellate cell1
regular atrial cardiac myocyte1
renal alpha-intercalated cell1
renal beta-intercalated cell1
renal connecting tubule1
renal epithelial cell1
renal principal cell1
respiratory goblet cell1
schwann cell1
sensory neuron1
skeletal muscle fibroblast1
small intestine goblet cell1
stellate neuron1
stomach neuroendocrine cell1
stromal cell1
type I cell of adrenal cortex1
type II cell of adrenal cortex1
ureteric bud1
uterine smooth muscle cell1
ventricular cardiac muscle cell1
cell line
HeLa-S355531
A5492119181
H1-hESC139181
K56272371
MCF-79651
HFFc619
H9781
EndoC_BH11831
GM128782821
SK-N-SH4321
pituitary stalk10
HepG22322
endometrium adenocarcinoma333
immortal human breast epithelial cell line cell333
lymphocyte171
22Rv1422
SK-N-DZ422
induced pluripotent stem cell17
LNCaP clone FGC322
T47D322
WI38511
HCT116231
HEK2933111
IMR-902211
NAMALWA cell222
iPSC derived cell line42
lymphoblastoid cell line6
A673221
GM069902111
GM087142111
GM128642111
GM128652111
GM128752111
GM192381211
GM192391211
GM192401211
HAP-1221
HL-602111
HT-29221
KARPAS-422 cell122
MM.1S221
NB42111
OCI-LY7221
PC-9221
Panc1221
SK-N-MC2111
WERI-Rb-12111
iPS DF 19.11221
A172211
ACC112211
ACHN211
AG04449 cell1111
AG04450 cell1111
AG09309 cell1111
AG09319 cell1111
AG10803 cell1111
BE(2)-C1111
BJ cell1111
C4-2B211
CMK211
Caco-2 cell1111
Caki2211
CyT494
DND-41211
DOHH2211
Daoy211
EH211
EL211
ELF-1211
ELR211
G401211
GM04503211
GM04504211
GM10248211
GM10266211
GM128911111
GM128921111
GM18507121
GM23248211
GM23338211
H4211
H54211
H7-hESC121
HS-27A211
HS-5211
HT1080211
HUES48211
HUES6211
HUES64211
HUES84
KBM-7211
KMS-11211
KOPT-K1211
L1-S8211
LHCN-M2211
LoVo cell121
Loucy211
M059J211
MG63211
NCI-H929211
NT2-D1 cell1111
OCI-LY1211
OCI-LY3211
PC-3211
RCC 7860211
RPMI7951211
RPMI8226211
RWPE1211
RWPE2211
SJCRH30211
SJSA1211
SK-MEL-5211
SU-DHL-6211
SW480211
UCSF-4211
iPS DF 19.7211
iPS DF 6.9211
iPS-11a211
iPS-15b211
iPS-18a211
iPS-18c211
iPS-20b211
8988T111
AG08395 cell111
AG08396 cell111
AG20443111
COLO829111
CWRU1111
ES-I3111
GM03348111
HEK293T111
HK-2 cell111
HPDE6-E6E7111
HTR-8/Svneo111
HuH-7111
HuH-7.5111
L1-S8R111
LNCAP21
MCF 10A3
NCI-H226 cell111
NCI-H460 cell111
VCaP cell111
colon carcinoma111
colon epithelial cell111
foreskin fibroblast111
iPS DF 4.7 Cell Line111
iPS-NIHi11111
iPS-NIHi7111
medulloblastoma111
renal cell carcinoma111
urothelium cell line111
AG108032
BJAB cell2
ESC derived cell line2
GM1280111
GM1287311
GM1287411
GM1850511
GM1909911
GM1919311
HCT-116 cell11
HFF-Myc11
Jurkat2
MCF 10A cell2
MIN62
NAMALWA2
THP-12
U9372
muscle2
AG044491
AG044501
AG093091
AG093191
B-lymphoblastoid cell line1
BE2C1
BJ1
BL-2 cell1
Caco-21
D721Med1
DG-75 cell1
DND-41 cell1
ECC-11
GM108471
GM128721
GM139761
GM139771
GM155101
GM184861
GM185081
GM185161
GM185221
GM185261
GM189511
GM191411
GM192041
GM200001
H11
H71
HAC cell1
HBMEC cell1
HCEC 1CT1
HEK293-T-REx cell1
HGPS cell1
HK-21
Ishikawa1
JVM-2 cell1
Jurkat, Clone E6-11
Karpas-4221
LoVo1
MCF10A-Er-Src cell1
MDA-MB-231 cell1
NCCIT cell1
NCI-H2261
NCI-H4601
NHEK1
NT2/D11
Normal Human Astrocytes1
PANC-1 cell1
PFSK-1 cell1
RCC1
RCC 7860 HIF1a re-expression1
RCC 7860 HIF2a over-expression1
RCC 7860 vector1
RKO1
Raji cell1
SAEC1
SH-SY5Y cell1
SK-N-SH_RA1
SUDHL51
T-47D cell1
U-266 cell1
U-87 MG1
U2OS1
VCaP1
WI-38 cell1
Z-1381
cells - EBV-transformed lymphocytes1
esophageal epithelial cell1
fibroblast cell line1
glioblastoma cell1
glomerular visceral epithelial cell1
iPS DF 4.71
macrophage1
monocyte1
smooth muscle cell of the coronary artery1
spinal cord1
in vitro differentiated cells
hematopoietic multipotent progenitor cell1910101
neural progenitor cell5547
adipocyte4661
cardiomyocytes11
extended pluripotent stem (EPS) cells9
induced pluripotent stem cell9
progenitor cell of endocrine pancreas9
cardiomyocytes (cardiac muscle cell)341
endodermal cell422
mesenchymal stem cell332
cardiac muscle cell411
cardiac precursors (cardiac muscle cell)141
dendritic cell6
embryonic stem cell15
mesodermal cell411
muscle cell222
bipolar neuron221
mesendoderm221
neural cell311
smooth muscle cell2111
trophoblast cell221
ectodermal cell211
hepatocyte211
islet precursor cell211
neuron211
cardiac mesoderm primordium111
hepatocyte(AFP)3
neuronal stem cell21
olfactory neurosphere cell line111
pancreatic ductal cell3
Pancreatic progenitors (progenitor cell of endocrine pancreas)2
cardiac myoblast2
cardiovascular progenitor cell2
lymphocyte of B lineage (iPSC)2
myocyte11
myotube11
neuroepithelial stem cell2
Adipose SGBS cell line (adipocyte)1
ESC dervived hypothalamic neuron (arcuate nucleus)1
ESC dervived hypothalamic progenitor (arcuate nucleus)1
Human Mesenchymal Cell derived Adipocytes1
Human Mesenchymal Cell derived Osteoblasts1
Preadipose SGBS cell line (adipocyte)1
cardiac fibroblast1
cardiac muscle cell (pacemaker cell)1
ecto neural progenitor cell1
endothelial cell1
excitatory neuron1
hippocampal neuron1
intermediate cardiomyocytes1
intermediate endothelial cell1
intermediate smooth muscle cell1
lower motor neuron1
mesodermal cell (lineage marker-negative)1
mesodermal cell (pacemaker intermediate)1
mid-neurogenesis radial glial cells1
radial glial cell1
skeletal muscle myoblast1
stem cell1
white adipose cell1
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1