Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 94histone modifications
  • 77candidate regulatory elements
  • 74gene expression
  • 69accessible chromatin
  • 64target gene predictions
  • 43chromatin state
  • 38binding sites
  • 6variant allelic effects
  • 1representative DNase hypersensitivity sites
Date released
  • 188February, 2021
  • 102September, 2022
  • 39May, 2021
  • 32February, 2024
  • 31August, 2021
  • 21June, 2020
  • 18November, 2022
  • 10March, 2020
  • 7May, 2020
  • 4August, 2017
  • 4September, 2023
  • 3January, 2020
  • 3January, 2022
  • 2November, 2019
  • 2October, 2019
Available data
  • 344bed bed3+
  • 75tsv
  • 39bed bed9
  • 24csv
  • 12bigWig
  • 5bigBed bed9
Organism
  • 466Homo sapiens
Collection Tags
  • 139ChIP-Atlas
  • 102EpiMap
  • 97AMP
  • 48DGA
  • 46ENCODE
  • 23CMDGA
  • 7 T2DKP
  • 4T2DKP
Biosample type
  • 5323tissue
  • 2517primary cell
  • 2351cell line
  • 466in vitro differentiated cells
  • 4stem cell
Organ
  • 50connective tissue
  • 26embryo
  • 26epithelium
  • 9skin of body
  • 7liver
  • 6eye
  • 6penis
  • 5extraembryonic component
  • 4brain
  • 4nose
  • 3mammary gland
  • 3pancreas
  • 2lymphatic vessel
  • 2musculature of body
  • 2vasculature
  • 1adipose tissue
  • 1heart
  • 1kidney
Project
  • 466AMP
Genome assembly (visualization)
  • 383hg19
  • 64GRCh38
biosample_term_name!
  • ectodermal cell
BIOSAMPLE
TYPE

466 results

search-icontable-tab-icon
Clear Filters
histone modifications
candidate regulatory elements
gene expression
accessible chromatin
target gene predictions
chromatin state
binding sites
variant allelic effects
representative DNase hypersensitivity sites
in vitro differentiated cells
neural progenitor cell15571054
hematopoietic multipotent progenitor cell1191110101
adipocyte1414661
embryonic stem cell16151
cardiomyocytes11
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego