Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
Date released
Available data
Organism
Collection Tags
Biosample type
Organ
Project
Genome assembly (visualization)
Encyclopedia version
biosample_term_name!
month_released!
BIOSAMPLE
TYPE

8385 results

search-icontable-tab-icon
Clear Filters
tissue
whole blood2635
heart2021
stomach2119
brain1618
kidney1416
lung1716
muscle of arm1616
small intestine1715
adrenal gland1714
placenta1514
muscle of leg1415
large intestine1413
left lung1313
liver109
muscle of back1313
thymus1411
islet of Langerhans13
retina33
right lung1111
right kidney1010
renal pelvis99
renal cortex interstitium99
adipose tissue86
heart left ventricle78
left kidney99
spinal cord87
spleen86
tibial nerve34
body of pancreas54
coronary artery33
pigmented layer of retina
caudate nucleus34
right atrium auricular region22
sigmoid colon75
tibial artery23
ovary64
pancreas53
psoas muscle84
frontal cortex22
heart right ventricle55
omental fat pad22
thyroid gland54
transverse colon54
cerebellum22
gastrocnemius medialis54
subcutaneous adipose tissue1
substantia nigra23
ascending aorta23
muscle of trunk54
putamen11
chorionic villus44
endocrine pancreas44
testis33
Ammon's horn21
aorta44
layer of hippocampus34
left cardiac atrium16
skeletal muscle tissue33
Peyer's patch33
chorion membrane33
temporal lobe25
upper lobe of left lung33
thoracic aorta23
angular gyrus24
breast epithelium32
esophagus32
esophagus muscularis mucosa22
left renal cortex interstitium22
left renal pelvis22
prostate gland22
right lobe of liver11
right renal cortex interstitium22
right renal pelvis22
trophoblast32
vagina22
cingulate gyrus23
colonic mucosa23
duodenal mucosa23
esophagus squamous epithelium22
eye22
limb22
mucosa of rectum23
occipital lobe11
right cardiac atrium23
stomach smooth muscle23
tongue22
urinary bladder22
uterus21
Brodmann (1909) area 4622
amygdala
anterior cingulate cortex
cerebellum (Hemisphere)
globus pallidus11
hypothalamus
lower leg skin22
medulla oblongata11
midbrain11
muscle layer of colon22
muscle layer of duodenum22
nucleus accumbens
parathyroid adenoma22
pons11
skin of body11
superior temporal gyrus11
C1 segment of cervical spinal cord
cerebellar cortex11
gastrocnemius medialis(Muscle - Skeletal)
left ventricle myocardium
middle frontal gyrus11
cartilage tissue2
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
embryonic facial prominence11
germinal matrix12
inferior parietal cortex11
rectum smooth muscle tissue12
umbilical cord11
amnion11
arm bone11
femur11
gastroesophageal sphincter11
germinal center11
leg bone11
mucosa of stomach11
hindlimb muscle
muscle of leg
blood
blood vessel
cortex of kidney
dorsolateral prefrontal cortex1
minor salivary gland
pancreatic ductal cell
pancreatic stellate cell
tissue
left kidney
omental fat pad
Pancreatic islets
Schwann cell
abdominal aorta artery
aortic valve
beige adipocyte1
bladder
bladder (urinary bladder)1
breast
breast - mammary tissue
cardiac ventricle1
cerebellar hemisphere
cerebrospinal fluid1
cervix - ectocervix
cervix - endocervix
colon - sigmoid
colon - transverse
colon sigmoid
cortex
crypt of Lieberkuhn
diencephalon
endothelial cell
esophagus - gastroesophageal junction
esophagus - mucosa
esophagus - muscularis
esophagus mucosa
fallopian tube
fetal heart
forelimb muscle
gastric (mucosa of stomach)1
glomerular epithelium
kidney - cortex
kidney - medulla
metanephros
mid-frontal lobe1
mitral valve
nephron tubule
pancreatic A cell
pancreatic D cell
pancreatic PP cell
pancreatic acinar cell
parietal lobe
pituitary
pituitary gland
prefrontal cortex
prostate
pulmonary valve
renal cortex tubule
renal glomerulus
skeletal muscle1
skin - not sun exposed (suprapubic)
skin - sun exposed (lower leg)
small intestine - terminal Ileum
subcutaneous abdominal adipose tissue1
synovial joint
thyroid
tissue-resident macrophage
tricuspid valve
type B pancreatic cell
visceral abdominal adipose tissue
white adipose tissue1
primary cell
monocyte2
endothelial cell7
B cell108
macrophage3
CD8-positive, alpha-beta T cell51
T cell44
fibroblast4
smooth muscle cell6
common myeloid progenitor, CD34-positive1413
natural killer cell53
hepatocyte31
CD14-positive monocyte194
CD4-positive, alpha-beta memory T cell99
pericyte cell101
regulatory T cell43
adipocyte
cardiac muscle cell1
pancreatic ductal cell3
CD8-positive, alpha-beta memory T cell77
T-helper 1 cell33
neuron
T-helper 17 cell33
endothelial cell of lymphatic vessel1
pericyte
mononuclear cell66
astrocyte41
mast cell1
pancreatic beta cell2
dendritic cell
endothelial cell of hepatic sinusoid
pancreatic acinar cell3
pancreatic delta cell4
T-helper 2 cell33
endocardial cell1
endothelial cell of umbilical vein45
pancreatic alpha cell2
skeletal muscle satellite cell22
trophoblast cell54
fibroblast of lung44
keratinocyte53
neutrophil32
excitatory neuron
fibroblast of cardiac tissue43
foreskin keratinocyte44
hepatic stellate cell11
mammary gland epithelial cell43
skeletal muscle myoblast23
erythroblast22
fibroblast of dermis43
epithelial cell of proximal tubule11
naive thymus-derived CD4-positive, alpha-beta T cell2
osteoblast21
kidney tubule cell22
memory B cell2
naive T cell33
naive thymus-derived CD8-positive, alpha-beta T cell2
neurosphere33
pancreatic A cell3
skeletal muscle fiber
skin fibroblast32
type B pancreatic cell3
glomerular endothelial cell11
glutamatergic neuron2
pancreatic stellate cell1
CD4-positive, alpha-beta T cell33
bronchial epithelial cell22
epithelial cell of prostate32
foreskin fibroblast21
kidney glomerular epithelial cell11
leukocyte
luminal epithelial cell of mammary gland31
mature neutrophil7
mesothelial cell1
renal cortical epithelial cell11
retinal pigment epithelial cell11
type I muscle cell1
type II muscle cell1
type II pneumocyte2
acinar cell
alternatively activated macrophage14
choroid plexus epithelial cell11
colon epithelial cell3
cortical cell of adrenal gland2
dermis blood vessel endothelial cell22
dermis lymphatic vessel endothelial cell22
enterocyte
fibroblast of breast22
glomerular visceral epithelial cell11
kidney epithelial cell11
mesenchymal stem cell1
myoepithelial cell of mammary gland22
naive B cell2
olfactory receptor cell6
pancreatic polypeptide-secreting cell1
cardiac fibroblast
Adaptive / Maladaptive / Repairing Fibroblast
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
Afferent / Efferent Arteriole Endothelial Cell
B Cell
CD14-positive, CD16-negative classical monocyte5
CD4-positive helper T cell2
Classical Dendritic Cell
Connecting Tubule Cell
Connecting Tubule Intercalated Cell Type A
Connecting Tubule Principal Cell
Cortical Thick Ascending Limb Cell
Cycling Endothelial Cell
Cycling Epithelial Cell
Cycling T Cell
Cytotoxic T Cell
Degenerative Connecting Tubule Cell
Degenerative Connecting Tubule Cell / Principal Cell
Degenerative Cortical Thick Ascending Limb Cell
Degenerative Distal Convoluted Tubule Cell
Degenerative Intercalated Cell Type A
Degenerative Peritubular Capillary Endothelial Cell
Degenerative Principal Cell
Degenerative Proximal Tubule Epithelial Cell
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
Degenerative Vascular Smooth Muscle Cell
Descending Thin Limb Cell Type 1
Distal Convoluted Tubule Cell Type 1
Fibroblast
Glomerular Capillary Endothelial Cell
Intercalated Cell Type A
Intercalated Cell Type B
Lymphatic Endothelial Cell
M2 Macrophage
Medullary Thick Ascending Limb Cell
Mesangial Cell
Monocyte
Monocyte-derived Cell
Myofibroblast
Natural Killer T Cell
Natural Killer T Cell Type 1
Natural Killer T Cell Type 2
Non-Classical Monocyte
Parietal Epithelial Cell
Peritubular Capillary Endothelial Cell
Plasma Cell
Plasmacytoid Dendritic Cell
Podocyte
Principal Cell
Proximal Tubule Epithelial Cell Segment 1 and 2
Proximal Tubule Epithelial Cell Segment 3
Regulatory T Cell
Renin-positive Juxtaglomerular Granular Cell
T Cell
T follicular helper cell
Transitional Principal-Intercalated Cell
Vascular Smooth Muscle Cell / Pericyte
astrocyte of the cerebellum11
astrocyte of the hippocampus11
basal cell1
central memory CD8-positive, alpha-beta T cell
cholangiocyte
effector memory CD8-positive, alpha-beta T cell
epithelial cell of esophagus11
fibroblast of mammary gland11
fibroblast of pulmonary artery11
fibroblast of villous mesenchyme11
gabaergic neuron2
inflammatory macrophage13
inhibitory neuron
kidney capillary endothelial cell11
mesenchymal stem cell of adipose tissue
myofibroblast cell
oligodendrocyte1
oligodendrocyte precursor cell1
pancreatic D cell
pancreatic endothelial cell
skeletal muscle cell11
smooth muscle cell of the brain vasculature11
CD1c-positive myeloid dendritic cell11
activated CD4-positive, alpha-beta T cell2
articular chondrocyte
blood vessel smooth muscle cell2
brain microvascular endothelial cell11
effector CD4-positive, alpha-beta T cell
enteric smooth muscle cell2
fibroblast of peridontal ligament11
fibroblast of the aortic adventitia11
gamma-delta T cell
iris pigment epithelial cell11
mammary epithelial cell11
mature natural killer cell
megakaryocyte2
memory T cell
memory regulatory T cell
mesothelial cell of epicardium
myeloid cell
neural cell
non-pigmented ciliary epithelial cell11
pancreatic MUC5B+ductal cell
pancreatic alpha+beta cell
pancreatic cycling alpha cell
pancreatic gamma+epsilon cell
pancreatic macrophage cell
pancreatic mast cell
pulmonary artery endothelial cell11
renal principal cell
smooth muscle cell of the esophagus2
type I pneumocyte1
Cycling Mononuclear Phagocyte
Mast Cell
Schwann cell
activated CD8-positive, alpha-beta T cell1
amnion mesenchymal stem cell11
amniotic stem cell11
aortic endothelial cell
astrocyte of the spinal cord11
blood cell
ciliated cell1
club cell1
enteric neuron1
epidermal melanocyte11
epithelial cell of amnion11
fibro-adipogenic progenitor cell
fibroblast of gingiva11
fibroblast of the conjunctiva11
foreskin melanocyte11
glial cell
goblet cell
kidney connecting tubule epithelial cell
lung microvascular endothelial cell11
mammary stem cell11
mesangial cell
microglial cell1
naive B cel
naive regulatory T cell
naive t cell1
neuromuscular junction nucleus
pancreatic quiescent stellate cell
parietal cell1
peptic cell1
plasma cell1
plasmacytoid dendritic cell1
regular cardiac myocyte11
renal intercalated cell
schwann cell1
smooth muscle cell of the coronary artery1
stromal cell of bone marrow11
thyroid follicular cell1
type 1 muscle cell
type 2a muscle cell
type 2x muscle cell
Muller cell
T-cell2
acute myeloid leukemia cell
alveolar macrophage1
aortic adventitial fibroblast
basal cell of epidermis1
bone marrow cell
brain pericyte
capillary endothelial cell
cardiac endothelial cell1
colon goblet cell1
conventional dendritic cell1
eccrine cell1
enterochromaffin-like cell1
enterocyte of epithelium of small intestine1
epithelial cell of distal tubule
erythrocyte
extracellular matrix secreting cell
fat cell1
fetal cardiomyocyte
foveolar cell of stomach1
granular cell of epidermis1
intestinal tuft cell1
kidney distal convoluted tubule epithelial cell
kidney loop of Henle thick ascending limb epithelial cell
luteal cell1
mature NK T cell1
melanocyte1
myeloid dendritic cell
myoepithelial cell1
natural killer cell mediated cytotoxicity1
neuronal stem cell
non keratinizing barrier epithelial cell1
non-classical monocyte1
paneth cell1
regular atrial cardiac myocyte1
regular ventricular cardiac myocyte
renal epithelial cell
respiratory goblet cell1
skeletal muscle fibroblast1
small intestine goblet cell1
stellate neuron1
stomach neuroendocrine cell1
stromal cell1
stromal cell of endometrium
type I cell of adrenal cortex1
type II cell of adrenal cortex1
uterine smooth muscle cell1
vascular associated smooth muscle cell
ventricular cardiac muscle cell1
brain microvascular endothelial cell
retinal pigment epithelial cell
B cell, CD19-positive1
B-1 B cell
B-1a B cell
B-2 B cell
B-Lymphocytes
B-lymphocyte
CD34-PB1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell1
CD4-Positive T-Lymphocytes
CD4-positive, CD25-positive, alpha-beta regulatory T cell
CD56-positive, CD161-positive immature natural killer cell1
Glioblastoma
Heart fetal (cardiac muscle cell)
Ishikawa
Leydig cell
Liver fetal (hepatocyte)
Satellite Cells, Skeletal Muscle
Th1 cell
Th17 cell
Th2 cell
activated pancreatic stellate cell
adult endothelial progenitor cell1
bronchial goblet cell
cardiac atrium fibroblast
cardiac fibroblast
cardiac ventricle fibroblast
cell1
cells - cultured fibroblasts
central memory CD4-positive, alpha-beta T cell
chromaffin cell of adrenal gland
ciliated epithelial cell
cytotoxic T cell
dedifferentiated amniotic fluid mesenchymal stem cell
effector CD8-positive, alpha-beta T cell
effector memory CD4-positive, alpha-beta T cell
embryonic stem cell
endothelial cell of artery
endothelial cell of coronary artery
enteroendocrine cell
ependymal cell
erythroid cell
extravillous trophoblast
fetal thymocyte
fibro/adipogenic progenitor cell
fibroblast of arm1
gastric goblet cell
granulosa cell
helper T cell
hepatoblast
immature natural killer cell
islet of Langerhans
kidney granular cell
kidney inner medulla collecting duct epithelial cell
kidney interstitial cell
kidney interstitial fibroblast
kidney loop of Henle ascending limb epithelial cell
kidney loop of Henle epithelial cell
kidney loop of Henle thin descending limb epithelial cell
kidney proximal convoluted tubule epithelial cell
kidney proximal convoluted tubule epithelial cell & kidney proximal straight tubule epithelial cell
kidney proximal straight tubule epithelial cell
luminal epithelial cell of prostatic duct
lung neuroendocrine cell
lymphocyte of B lineage
lymphocyte(CL:0000542) and natural killer cell(CL:0000623)
macrophage(CL:0000235) and neutrophil(CL:0000775)
mature eosinophil1
megakaryocyte-erythroid progenitor cell1
mesenchymal cell
mesenchymal stem cell of adipose
metanephros
microglial cell/astrocyte
myotube
neoplastic cell
neuroendocrine cell
non-neuronal cell
pancreatic cell
pancreatic endocrine cell
pancreatic epsilon cell
pancreatic immune cell
parietal epithelial cell
pericardium fibroblast
peripheral blood stem cell
peripheral neuron
photoreceptor cell
placental hematopoietic stem cell
placental villus capillary endothelial cell
preadipocyte
primordial germ cell
progenitor cell
proximal tubule cells with injury markers
pulmonary interstitial fibroblast
quiescent pancreatic stellate cell
renal alpha-intercalated cell
renal beta-intercalated cell
retinal bipolar neuron
sensory neuron
somatic gonadal cell
sympathetic neuron
tracheal epithelial cell
trophoblast giant cell
ureteric bud
cell line
HeLa-S3553
A5491918
H1-hESC391
K562237
EndoC_BH11
HFFc619
MCF-765
GM1287882
HepG232
H981
pituitary stalk10
endometrium adenocarcinoma33
immortal human breast epithelial cell line cell33
lymphocyte71
SK-N-SH32
induced pluripotent stem cell1
NAMALWA cell22
SK-N-DZ22
lymphoblastoid cell line
22Rv122
GM1924021
IMR-9021
KARPAS-422 cell22
LNCaP clone FGC22
T47D22
iPSC derived cell line4
AG04449 cell11
AG04450 cell11
AG09309 cell11
AG09319 cell11
AG10803 cell11
BE(2)-C11
BJ cell11
Caco-2 cell11
GM0699011
GM1286411
GM1286511
GM1850721
GM1923821
GM1923921
H7-hESC21
HAP-121
HCT11631
HEK29311
HL-6011
HT-2921
HUES84
LoVo cell21
MM.1S21
NT2-D1 cell11
OCI-LY721
PC-921
SK-N-MC11
WERI-Rb-111
A17211
A67321
ACHN11
AG08396 cell11
CMK11
Caki211
CyT494
Daoy11
GM0334811
GM0450311
GM0450411
GM0871411
GM1024811
GM1026611
GM1287511
GM1289111
GM1289211
GM2324811
H411
HUES611
HuH-711
KBM-711
L1-S811
L1-S8R11
LHCN-M211
M059J11
MG6311
NB411
NCI-H226 cell11
PC-311
Panc121
RCC 786011
RPMI795111
RPMI822611
RWPE111
SJCRH3011
SJSA111
SW48011
iPS DF 19.1121
8988T11
ACC11211
AG08395 cell11
AG2044311
C4-2B11
COLO82911
CWRU111
DND-4111
DOHH211
EH11
EL11
ELF-111
ELR11
ES-I311
G40111
GM2333811
H5411
HCT-116 cell1
HEK293T11
HK-2 cell11
HPDE6-E6E711
HS-27A11
HS-511
HT108011
HTR-8/Svneo11
HUES4811
HUES6411
HuH-7.511
Jurkat2
KMS-1111
KOPT-K111
Loucy11
NCI-H460 cell11
NCI-H92911
OCI-LY111
OCI-LY311
RWPE211
SK-MEL-511
SU-DHL-611
U9372
UCSF-411
VCaP cell11
WI3811
colon carcinoma11
colon epithelial cell11
foreskin fibroblast11
iPS DF 19.711
iPS DF 4.7 Cell Line11
iPS DF 6.911
iPS-11a11
iPS-15b11
iPS-18a11
iPS-18c11
iPS-20b11
iPS-NIHi1111
iPS-NIHi711
medulloblastoma11
renal cell carcinoma11
urothelium cell line11
BJAB cell2
DG-75 cell1
ECC-1
ESC derived cell line2
GM185051
GM190991
GM191931
HAC cell
HBMEC cell
LNCAP1
MCF 10A cell2
MCF10A-Er-Src cell
MDA-MB-231 cell1
MIN6
NCCIT cell1
NHEK
Normal Human Astrocytes
PANC-1 cell
Rh-4 cell
SAEC
SK-N-SH_RA
SUDHL51
T-47D cell
THP-12
U-266 cell1
U-87 MG
U2OS
WI-38 cell
Z-1381
esophageal epithelial cell
fibroblast cell line1
fibroblast of cardiac tissue
glomerular visceral epithelial cell
macrophage1
muscle
spinal cord
786-O cell
A-673 cell
B-lymphoblastoid cell line1
BL-2 cell1
COLO-829 cell
COLO205
D341 Med cell
DND-41 cell
G-401 cell
GM10847
GM12801
GM12872
GM12873
GM12874
GM13976
GM13977
GM15510
GM184861
GM185081
GM185161
GM185221
GM18526
GM18951
GM191411
GM192041
GM20000
GP5d
HEK293-T-REx cell
HFF-Myc
HGF
HGPS cell
HeLa cell
Hodgkin lymphoma cell line
HuTu-80 cell
JVM-2 cell1
Kasumi-1
L-1236 cell
L-428 cell
MOLM-13 cell
Myoblasts
NB-4 cell
NHBE cell
NHDF cell
OCI-AML3
PA-TU-8988T cell
PFSK-1 cell
RCC 7860 HIF1a re-expression
RCC 7860 HIF2a over-expression
RCC 7860 vector
REH cell
RKO
RS4-11 cell
Raji cell
Rh-5 cell
Rhabdomyosarcoma
SGBS preadipocytes
SH-SY5Y cell
SK-CO-1
SKH1-Hr hr
SKMC
SW1116
Saos-2 cell
T84
ZR-75-1 cell
acute myeloid leukemia
adipose-derived mesenchymal stem cell
brain pericyte
cardiac myocyte cell derived cell line
cells - EBV-transformed lymphocytes
choroid plexus epithelial cell
colon cancer cell line
dermal fibroblast
epithelial cell of prostate
fibroblast of the conjunctiva
glioblastoma cell
hESC H9
hippocampus
human amniotic epithelial cell
immortal kidney-derived cell line cell
leukemic stem cell
lung fibroblast cell line
monocyte1
renal proximal tubule epithelial cell
urothelial cell
vascular smooth muscle cell
in vitro differentiated cells
neural progenitor cell54
hematopoietic multipotent progenitor cell1010
adipocyte66
embryonic stem cell15
extended pluripotent stem (EPS) cells
progenitor cell of endocrine pancreas
mesenchymal stem cell32
cardiomyocytes (cardiac muscle cell)3
dendritic cell6
endodermal cell22
muscle cell22
retinal pigment epithelial cell
SGBS preadipocytes
bipolar neuron21
chondrocyte
mesendoderm21
Pancreatic progenitors (progenitor cell of endocrine pancreas)
cardiac muscle cell11
olfactory neurosphere cell line11
smooth muscle cell11
trophoblast cell21
cardiac mesoderm primordium11
cardiac precursors (cardiac muscle cell)1
ectodermal cell11
hepatocyte11
hepatocyte(AFP)
islet precursor cell11
mesodermal cell11
neural cell11
neuron11
pancreatic ductal cell
B cell
adipose-derived stem cell
differentiating adipose-derived stem cell
excitatory neuron
hippocampal neuron
lower motor neuron
lymphocyte of B lineage (iPSC)2
neuronal stem cell1
Adipose SGBS cell line (adipocyte)
CD4-positive helper T cell
CD8-positive, alpha-beta T cell
ESC dervived hypothalamic neuron (arcuate nucleus)1
ESC dervived hypothalamic progenitor (arcuate nucleus)1
Human Mesenchymal Cell derived Adipocytes1
Human Mesenchymal Cell derived Osteoblasts1
Preadipose SGBS cell line (adipocyte)
Progenitor cell of Hypothalamus (neural progenitor cell)
T cell
cardiac fibroblast
cardiac muscle cell (pacemaker cell)
cardiac precursors
dermis microvascular lymphatic vessel endothelial cell
endothelial cell
erythroid cell
foreskin keratinocyte
foreskin melanocyte
iPS DF 4.7 Cell Line
intermediate cardiomyocytes
intermediate endothelial cell
intermediate smooth muscle cell
mammary gland epithelial cell
mesodermal cell (lineage marker-negative)
mesodermal cell (pacemaker intermediate)
myotube1
natural killer cell
neuron cell of Hypothalamus (neuron)
renal cell carcinoma
skeletal muscle myoblast1
skin fibroblast
stem cell
white adipose cell1
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1