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Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
2638
pQTL
1630
candidate regulatory elements
1292
target gene predictions
900
chromatin state
883
histone modifications
856
accessible chromatin
779
binding sites
611
gene expression
484
differential activity
180
eQTL
135
variant allelic effects
74
Fine-mapped variants
25
caQTL
7
sQTL
5
hQTL
4
variant to gene
3
meQTL
3
other
Date released
2636
February, 2025
2406
September, 2022
2401
February, 2021
350
May, 2021
341
February, 2024
333
November, 2021
320
May, 2026
282
September, 2023
268
June, 2020
148
May, 2020
118
March, 2020
103
January, 2022
101
October, 2022
97
August, 2021
86
January, 2020
70
March, 2023
64
February, 2020
56
January, 2021
49
May, 2022
40
May, 2024
33
July, 2025
32
February, 2023
31
August, 2017
30
March, 2024
26
November, 2022
19
April, 2020
12
November, 2019
12
October, 2019
9
August, 2018
9
May, 2019
8
April, 2019
4
March, 2026
3
November, 2020
3
September, 2018
2
January, 2018
2
January, 2025
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
5737
bed bed3+
3476
tsv
829
bed bed9
534
bigWig
112
txt
35
bigBed bed9
34
bed bed9+
16
bigBed narrowPeak
12
bed bed3
12
bed narrowPeak
4
bam
3
bed gappedPeak
3
xls
2
csv
Organism
10461
Homo sapiens
Collection Tags
2635
UK_Biobank
2394
EpiMap
1709
ChIP-Atlas
919
ENCODE
598
DGA
437
AMP
421
T1D
402
T2DKP
320
pyxis
281
KPMP
219
BLUEPRINT
174
4DN
167
T2DKP
151
GTEx
111
T2D
101
eQTLCatalogue
77
CMDGA
67
HPAP
26
FNIH_projects-heart
12
FNIH_projects-liver
12
ROADMAP
Biosample type
5287
tissue
2864
primary cell
2352
cell line
in vitro differentiated cells
4
stem cell
Organ
2903
vasculature
2853
bodily fluid
2848
blood vessel
2842
blood
2658
vein
935
epithelium
668
kidney
481
brain
471
connective tissue
384
musculature of body
370
heart
311
lung
298
pancreas
289
intestine
244
limb
195
skin of body
185
embryo
180
liver
174
large intestine
141
extraembryonic component
137
adipose tissue
119
stomach
103
eye
89
bone element
84
mammary gland
84
small intestine
83
artery
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
64
ureter
62
lymph node
60
__MARKER__
58
penis
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
22
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
1
pericardium
Project
9794
AMP
333
ENCODE
281
KPMP
60
T1D
19
LungMap
17
community
5
ITG
Genome assembly (visualization)
6615
hg19
1856
GRCh38
4
hg18
Encyclopedia version
1
Adipocyte.narrowpeak.bed.gz Adipocyte.consensus_summit_features.bed.gz
1
Endothelial.narrowpeak.bed.gz Endothelial.consensus_summit_features.bed.gz
1
FAP.narrowpeak.bed.gz Mesenchymal_Stem_Cell.consensus_summit_features.bed.gz
1
Macrophage.narrowpeak.bed.gz Macrophage.consensus_summit_features.bed.gz
1
Neuromuscular_junction.narrowpeak.bed.gz Neuromuscular_junction.consensus_summit_features.bed.gz
1
Neuronal.narrowpeak.bed.gz Neuronal.consensus_summit_features.bed.gz
1
Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
1
Smooth_Muscle.narrowpeak.bed.gz Smooth_Muscle.consensus_summit_features.bed.gz
1
T_cell.narrowpeak.bed.gz T_cell.consensus_summit_features.bed.gz
1
Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
1
Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
1
Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
biosample_term_name!
endometrial stromal cell
biosample_type!
in vitro differentiated cells
BIOSAMPLE
TYPE
10509 results
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Clear Filters
histone modifications
tissue
whole blood
2635
heart
stomach
kidney
brain
+ See 261 more…
primary cell
monocyte
endothelial cell
B cell
common myeloid progenitor, CD34-positive
macrophage
+ See 464 more…
cell line
HeLa-S3
A549
H1-hESC
K562
MCF-7
+ See 765 more…
stem cell
H1-hESC
mesenchymal stem cell
mesendoderm
undifferentiated ESC (H9 cell line)
See all biosamples
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