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Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1101
target gene predictions
795
accessible chromatin
469
gene expression
447
differential activity
363
candidate regulatory elements
209
histone modifications
197
chromatin state
98
binding sites
79
variant allelic effects
53
eQTL
20
caQTL
5
hQTL
5
sQTL
3
meQTL
1
other
Date released
1051
July, 2026
487
September, 2022
449
February, 2021
317
November, 2021
295
May, 2026
281
September, 2023
255
May, 2021
147
February, 2024
86
May, 2020
55
March, 2023
54
January, 2021
53
June, 2020
38
August, 2021
38
May, 2022
37
January, 2022
37
May, 2024
30
July, 2025
30
October, 2022
23
January, 2020
19
April, 2020
16
February, 2020
9
August, 2018
9
November, 2022
7
October, 2019
6
August, 2017
5
March, 2020
3
February, 2023
3
November, 2020
2
January, 2025
1
July, 2020
1
June, 2021
1
March, 2024
Available data
2687
bed bed3+
602
tsv
397
bigWig
164
bed bed9
105
txt
27
bed bed9+
16
bigBed narrowPeak
11
bed bed3
11
bed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
2
csv
Organism
3800
Homo sapiens
Collection Tags
543
ENCODE-rE2G
480
EpiMap
375
HDMA
361
DGA
355
AMP
343
T2DKP
328
T1D
295
pyxis
281
KPMP
213
ChIP-Atlas
211
BLUEPRINT
207
ENCODE
133
CATlas
75
T2DKP
55
HPAP
44
T2D
35
eQTLCatalogue
24
FNIH_projects-heart
14
CMDGA
12
ROADMAP
11
FNIH_projects-liver
6
4DN
1
GTEx
Biosample type
5950
tissue
3845
primary cell
2559
cell line
512
in vitro differentiated cells
4
stem cell
Organ
780
epithelium
466
blood
333
connective tissue
333
kidney
225
brain
195
heart
171
skin of body
169
vasculature
150
pancreas
128
liver
122
blood vessel
78
lung
68
eye
62
musculature of body
57
__MARKER__
50
mammary gland
47
adipose tissue
43
extraembryonic component
41
penis
40
muscle organ
36
artery
34
thymus
24
adrenal gland
24
spleen
23
intestine
22
embryo
22
thyroid gland
20
vein
18
bone element
17
lymphatic vessel
16
bronchus
13
bone marrow
11
esophagus
11
placenta
11
prostate gland
11
stomach
9
bodily fluid
6
large intestine
5
skeleton
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
2
ovary
1
limb
1
pericardium
1
testis
Project
3167
AMP
317
ENCODE
281
KPMP
57
T1D
19
LungMap
4
community
Genome assembly (visualization)
1808
hg19
1786
GRCh38
Encyclopedia version
1
Adipocyte.narrowpeak.bed.gz Adipocyte.consensus_summit_features.bed.gz
1
FAP.narrowpeak.bed.gz Mesenchymal_Stem_Cell.consensus_summit_features.bed.gz
1
Macrophage.narrowpeak.bed.gz Macrophage.consensus_summit_features.bed.gz
1
Neuromuscular_junction.narrowpeak.bed.gz Neuromuscular_junction.consensus_summit_features.bed.gz
1
Neuronal.narrowpeak.bed.gz Neuronal.consensus_summit_features.bed.gz
1
Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
1
Smooth_Muscle.narrowpeak.bed.gz Smooth_Muscle.consensus_summit_features.bed.gz
1
T_cell.narrowpeak.bed.gz T_cell.consensus_summit_features.bed.gz
1
Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
1
Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
1
Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
biosample_term_name!
endothelial cell
BIOSAMPLE
TYPE
3845 results
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target gene predictions
accessible chromatin
gene expression
differential activity
candidate regulatory elements
histone modifications
chromatin state
binding sites
variant allelic effects
eQTL
caQTL
hQTL
sQTL
meQTL
other
primary cell
monocyte
2
18
15
4
86
1
4
2
1
1
fibroblast
28
40
10
3
1
6
2
CD8-positive, alpha-beta T cell
27
4
3
7
30
1
macrophage
13
22
2
17
3
3
8
2
T-cell
64
4
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