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Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
3014
target gene predictions
2638
pQTL
1706
candidate regulatory elements
1242
accessible chromatin
977
histone modifications
944
chromatin state
817
binding sites
685
gene expression
472
differential activity
180
eQTL
141
variant allelic effects
74
Fine-mapped variants
25
caQTL
7
sQTL
5
hQTL
4
variant to gene
3
meQTL
3
other
1
representative DNase hypersensitivity sites
Date released
2636
February, 2025
2590
February, 2021
2511
September, 2022
1978
July, 2026
389
May, 2021
373
February, 2024
330
November, 2021
308
May, 2026
289
June, 2020
286
September, 2023
155
May, 2020
128
August, 2021
128
March, 2020
106
January, 2022
101
October, 2022
89
January, 2020
70
March, 2023
64
February, 2020
56
January, 2021
49
May, 2022
44
November, 2022
37
May, 2024
35
August, 2017
33
July, 2025
32
February, 2023
30
March, 2024
18
April, 2020
14
November, 2019
14
October, 2019
9
August, 2018
9
May, 2019
8
April, 2019
4
March, 2026
3
November, 2020
3
September, 2018
2
January, 2018
2
January, 2025
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
8055
bed bed3+
3551
tsv
869
bed bed9
543
bigWig
112
txt
40
bigBed bed9
34
bed bed9+
26
csv
16
bigBed narrowPeak
12
bed bed3
12
bed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
12890
Homo sapiens
Collection Tags
2635
UK_Biobank
2499
EpiMap
1848
ChIP-Atlas
1458
ENCODE-rE2G
966
ENCODE
646
DGA
531
AMP
421
T1D
403
T2DKP
387
HDMA
308
pyxis
281
KPMP
219
BLUEPRINT
174
T2DKP
174
4DN
151
GTEx
133
CATlas
111
T2D
101
eQTLCatalogue
100
CMDGA
67
HPAP
24
FNIH_projects-heart
12
ROADMAP
11
FNIH_projects-liver
Biosample type
5951
tissue
3908
primary cell
2559
cell line
514
in vitro differentiated cells
4
stem cell
Organ
3365
blood
2898
vasculature
2861
blood vessel
2853
bodily fluid
2659
vein
948
epithelium
903
brain
756
kidney
515
connective tissue
478
heart
438
lung
386
musculature of body
358
intestine
319
pancreas
294
skin of body
244
limb
239
liver
226
large intestine
215
embryo
174
extraembryonic component
161
eye
140
stomach
139
adipose tissue
111
muscle organ
106
bone element
104
mammary gland
102
adrenal gland
97
placenta
97
small intestine
93
thymus
93
uterus
88
artery
87
prostate gland
73
ureter
64
gonad
64
penis
63
spleen
62
lymph node
59
__MARKER__
49
spinal cord
48
esophagus
47
thyroid gland
32
ovary
31
testis
25
nerve
24
lymphoid tissue
24
skeleton
21
mouth
17
lymphatic vessel
16
bronchus
15
breast
13
bone marrow
13
pituitary gland
13
urinary bladder
12
tongue
12
vagina
5
trachea
4
nose
1
embryonic structure
1
gallbladder
1
pericardium
Project
12227
AMP
330
ENCODE
281
KPMP
60
T1D
18
LungMap
17
community
5
ITG
Genome assembly (visualization)
6995
hg19
3893
GRCh38
4
hg18
Encyclopedia version
1
Adipocyte.narrowpeak.bed.gz Adipocyte.consensus_summit_features.bed.gz
1
Endothelial.narrowpeak.bed.gz Endothelial.consensus_summit_features.bed.gz
1
FAP.narrowpeak.bed.gz Mesenchymal_Stem_Cell.consensus_summit_features.bed.gz
1
Macrophage.narrowpeak.bed.gz Macrophage.consensus_summit_features.bed.gz
1
Neuromuscular_junction.narrowpeak.bed.gz Neuromuscular_junction.consensus_summit_features.bed.gz
1
Neuronal.narrowpeak.bed.gz Neuronal.consensus_summit_features.bed.gz
1
Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
1
Smooth_Muscle.narrowpeak.bed.gz Smooth_Muscle.consensus_summit_features.bed.gz
1
T_cell.narrowpeak.bed.gz T_cell.consensus_summit_features.bed.gz
1
Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
1
Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
1
Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
biosample_term_name!
endothelial cell of lymphatic vessel
biosample_term_name!!
muscle of trunk
BIOSAMPLE
TYPE
12938 results
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Clear Filters
target gene predictions
pQTL
candidate regulatory elements
accessible chromatin
histone modifications
chromatin state
binding sites
gene expression
differential activity
eQTL
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood
2635
1
heart
38
37
5
1
21
1
4
1
2
stomach
42
40
3
1
19
1
1
kidney
28
29
10
2
16
1
7
1
1
brain
30
29
2
3
18
1
1
2
1
+ See 283 more…
primary cell
monocyte
2
18
86
1
15
4
4
1
2
1
fibroblast
28
3
40
1
10
2
6
endothelial cell
17
3
24
1
2
9
25
2
2
3
CD8-positive, alpha-beta T cell
27
7
4
30
1
3
macrophage
13
3
22
2
17
8
3
2
+ See 560 more…
cell line
A549
33
21
1
1
18
2
HeLa-S3
59