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Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1114
target gene predictions
813
accessible chromatin
478
gene expression
460
differential activity
363
candidate regulatory elements
210
histone modifications
197
chromatin state
100
binding sites
81
variant allelic effects
55
eQTL
23
caQTL
5
hQTL
5
sQTL
3
meQTL
1
other
Date released
1063
July, 2026
487
September, 2022
456
February, 2021
330
November, 2021
308
May, 2026
281
September, 2023
256
May, 2021
152
February, 2024
86
May, 2020
56
January, 2021
55
March, 2023
53
June, 2020
42
August, 2021
40
May, 2022
37
January, 2022
37
May, 2024
33
July, 2025
31
October, 2022
23
January, 2020
18
April, 2020
16
February, 2020
9
August, 2018
9
November, 2022
7
October, 2019
6
August, 2017
5
March, 2020
4
February, 2023
3
November, 2020
2
January, 2025
1
July, 2020
1
June, 2021
1
March, 2024
Available data
2725
bed bed3+
612
tsv
407
bigWig
164
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
12
bed bed3
12
bed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
2
csv
Organism
3863
Homo sapiens
Collection Tags
543
ENCODE-rE2G
480
EpiMap
387
HDMA
376
DGA
370
AMP
356
T2DKP
330
T1D
308
pyxis
281
KPMP
216
ChIP-Atlas
211
BLUEPRINT
208
ENCODE
133
CATlas
81
T2DKP
55
HPAP
45
T2D
35
eQTLCatalogue
24
FNIH_projects-heart
15
CMDGA
12
ROADMAP
11
FNIH_projects-liver
6
4DN
1
GTEx
Biosample type
5951
tissue
3908
primary cell
2559
cell line
514
in vitro differentiated cells
4
stem cell
Organ
818
epithelium
466
blood
335
connective tissue
335
kidney
231
brain
195
heart
169
skin of body
165
vasculature
150
pancreas
134
liver
123
blood vessel
76
lung
68
eye
62
musculature of body
59
__MARKER__
50
mammary gland
49
adipose tissue
46
muscle organ
43
extraembryonic component
41
penis
37
artery
36
thymus
25
adrenal gland
24
spleen
23
intestine
23
thyroid gland
22
embryo
20
vein
18
bone element
16
bronchus
13
bone marrow
13
lymphatic vessel
11
esophagus
11
placenta
11
prostate gland
11
stomach
9
bodily fluid
6
large intestine
5
skeleton
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
2
ovary
1
limb
1
pericardium
1
testis
Project
3216
AMP
330
ENCODE
281
KPMP
59
T1D
18
LungMap
4
community
Genome assembly (visualization)
1834
hg19
1814
GRCh38
Encyclopedia version
1
Adipocyte.narrowpeak.bed.gz Adipocyte.consensus_summit_features.bed.gz
1
Endothelial.narrowpeak.bed.gz Endothelial.consensus_summit_features.bed.gz
1
FAP.narrowpeak.bed.gz Mesenchymal_Stem_Cell.consensus_summit_features.bed.gz
1
Macrophage.narrowpeak.bed.gz Macrophage.consensus_summit_features.bed.gz
1
Neuromuscular_junction.narrowpeak.bed.gz Neuromuscular_junction.consensus_summit_features.bed.gz
1
Neuronal.narrowpeak.bed.gz Neuronal.consensus_summit_features.bed.gz
1
Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
1
Smooth_Muscle.narrowpeak.bed.gz Smooth_Muscle.consensus_summit_features.bed.gz
1
T_cell.narrowpeak.bed.gz T_cell.consensus_summit_features.bed.gz
1
Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
1
Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
1
Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
biosample_term_name!
endothelial cell of lymphatic vessel
BIOSAMPLE
TYPE
3908 results
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target gene predictions
accessible chromatin
gene expression
differential activity
candidate regulatory elements
histone modifications
chromatin state
binding sites
variant allelic effects
eQTL
caQTL
hQTL
sQTL
meQTL
other
primary cell
monocyte
2
18
15
4
86
1
4
2
1
1
fibroblast
28
40
10
3
1
6
2
endothelial cell
17
24
9
25
3
1
2
2
2
3
CD8-positive, alpha-beta T cell
27
4
3
7
30
1
macrophage
13
22
2
17
3
3
8
2
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