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Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1090
target gene predictions
779
accessible chromatin
478
gene expression
462
differential activity
363
candidate regulatory elements
210
histone modifications
197
chromatin state
99
binding sites
75
variant allelic effects
53
eQTL
23
caQTL
5
hQTL
5
sQTL
3
meQTL
1
other
Date released
1021
July, 2026
487
September, 2022
456
February, 2021
315
November, 2021
310
May, 2026
281
September, 2023
256
May, 2021
146
February, 2024
86
May, 2020
56
January, 2021
55
March, 2023
53
June, 2020
42
August, 2021
38
May, 2022
37
May, 2024
35
January, 2022
33
July, 2025
30
October, 2022
23
January, 2020
19
April, 2020
16
February, 2020
9
August, 2018
9
November, 2022
7
October, 2019
6
August, 2017
5
March, 2020
4
February, 2023
3
November, 2020
2
January, 2025
1
July, 2020
1
June, 2021
1
March, 2024
Available data
2658
bed bed3+
612
tsv
396
bigWig
164
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
12
bed bed3
12
bed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
2
csv
Organism
3798
Homo sapiens
Collection Tags
543
ENCODE-rE2G
480
EpiMap
368
DGA
353
AMP
345
HDMA
341
T2DKP
328
T1D
310
pyxis
281
KPMP
216
ChIP-Atlas
211
BLUEPRINT
205
ENCODE
133
CATlas
81
T2DKP
55
HPAP
43
T2D
33
eQTLCatalogue
24
FNIH_projects-heart
15
CMDGA
12
ROADMAP
11
FNIH_projects-liver
6
4DN
1
GTEx
Biosample type
5951
tissue
3843
primary cell
2558
cell line
512
in vitro differentiated cells
4
stem cell
Organ
822
epithelium
466
blood
335
kidney
309
connective tissue
231
brain
189
heart
169
vasculature
159
skin of body
150
pancreas
134
liver
123
blood vessel
74
lung
66
eye
62
musculature of body
56
__MARKER__
52
adipose tissue
50
mammary gland
44
muscle organ
43
extraembryonic component
41
penis
37
artery
30
thymus
25
adrenal gland
23
intestine
22
embryo
21
thyroid gland
20
vein
18
bone element
17
lymphatic vessel
16
bronchus
16
spleen
13
bone marrow
11
esophagus
11
placenta
11
prostate gland
11
stomach
9
bodily fluid
6
large intestine
5
skeleton
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
2
ovary
1
limb
1
pericardium
1
testis
Project
3165
AMP
315
ENCODE
281
KPMP
59
T1D
19
LungMap
4
community
Genome assembly (visualization)
1811
hg19
1753
GRCh38
Encyclopedia version
1
Adipocyte.narrowpeak.bed.gz Adipocyte.consensus_summit_features.bed.gz
1
Endothelial.narrowpeak.bed.gz Endothelial.consensus_summit_features.bed.gz
1
FAP.narrowpeak.bed.gz Mesenchymal_Stem_Cell.consensus_summit_features.bed.gz
1
Macrophage.narrowpeak.bed.gz Macrophage.consensus_summit_features.bed.gz
1
Neuromuscular_junction.narrowpeak.bed.gz Neuromuscular_junction.consensus_summit_features.bed.gz
1
Neuronal.narrowpeak.bed.gz Neuronal.consensus_summit_features.bed.gz
1
Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
1
Smooth_Muscle.narrowpeak.bed.gz Smooth_Muscle.consensus_summit_features.bed.gz
1
T_cell.narrowpeak.bed.gz T_cell.consensus_summit_features.bed.gz
1
Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
1
Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
1
Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
biosample_term_name!
fibroblast
BIOSAMPLE
TYPE
3843 results
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target gene predictions
accessible chromatin
gene expression
differential activity
candidate regulatory elements
histone modifications
chromatin state
binding sites
variant allelic effects
eQTL
caQTL
hQTL
sQTL
meQTL
other
primary cell
monocyte
2
18
15
4
86
1
4
2
1
1
endothelial cell
17
24
9
25
3
1
2
2
2
3
CD8-positive, alpha-beta T cell
27
4
3
7
30
1
macrophage
13
22
2
17
3
3
8
2
T-cell
64
4
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