Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 80candidate regulatory elements
  • 79target gene predictions
  • 73accessible chromatin
  • 63differential activity
  • 49gene expression
  • 48chromatin state
  • 29binding sites
  • 23histone modifications
  • 19eQTL
  • 10variant allelic effects
  • 6Fine-mapped variants
  • 3caQTL
  • 2pQTL
  • 2sQTL
Date released
  • 120September, 2022
  • 106February, 2021
  • 51May, 2026
  • 32November, 2021
  • 20June, 2020
  • 17September, 2023
  • 16May, 2021
  • 11August, 2021
  • 11October, 2022
  • 10February, 2024
  • 10January, 2020
  • 10May, 2020
  • 9February, 2020
  • 9March, 2020
  • 7August, 2017
  • 7March, 2023
  • 7November, 2022
  • 5July, 2026
  • 4January, 2022
  • 3April, 2020
  • 3November, 2020
  • 2January, 2021
  • 2January, 2025
  • 2July, 2025
  • 2May, 2024
  • 2October, 2019
  • 2September, 2018
  • 1August, 2018
  • 1February, 2023
  • 1January, 2018
  • 1June, 2021
  • 1May, 2022
Available data
  • 312bed bed3+
  • 64tsv
  • 41bed bed9
  • 41bigWig
  • 7txt
  • 2bigBed bed9
  • 2csv
  • 1bed bed3
  • 1bed narrowPeak
  • 1bigBed narrowPeak
Organism
  • 486Homo sapiens
Collection Tags
  • 120EpiMap
  • 62ChIP-Atlas
  • 62DGA
  • 57ENCODE
  • 51pyxis
  • 49T2DKP
  • 48AMP
  • 39 T2DKP
  • 15KPMP
  • 10CMDGA
  • 10GTEx
  • 9HPAP
  • 7T1D
  • 5ENCODE-rE2G
  • 5T2D
  • 4eQTLCatalogue
  • 1BLUEPRINT
Biosample type
  • 309primary cell
  • 96tissue
  • 50in vitro differentiated cells
  • 30cell line
  • 1stem cell
Organ
  • 3365blood
  • 2902vasculature
  • 2861blood vessel
  • 2853bodily fluid
  • 2659vein
  • 952epithelium
  • 903brain
  • 756kidney
  • 486connective tissue
  • 472heart
  • 436lung
  • 386musculature of body
  • 358intestine
  • 319pancreas
  • 284skin of body
  • 244limb
  • 239liver
  • 226large intestine
  • 215embryo
  • 174extraembryonic component
  • 159eye
  • 142adipose tissue
  • 140stomach
  • 109muscle organ
  • 106bone element
  • 104mammary gland
  • 102adrenal gland
  • 97placenta
  • 97small intestine
  • 93uterus
  • 88artery
  • 87prostate gland
  • 87thymus
  • 73ureter
  • 64gonad
  • 64penis
  • 62lymph node
  • 56__MARKER__
  • 55spleen
  • 49spinal cord
  • 48esophagus
  • 45thyroid gland
  • 32ovary
  • 31testis
  • 25nerve
  • 24lymphoid tissue
  • 24skeleton
  • 21lymphatic vessel
  • 21mouth
  • 16bronchus
  • 15breast
  • 13bone marrow
  • 13pituitary gland
  • 13urinary bladder
  • 12tongue
  • 12vagina
  • 5trachea
  • 4nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 426AMP
  • 32ENCODE
  • 15KPMP
  • 4ITG
  • 4community
  • 3LungMap
  • 2T1D
Genome assembly (visualization)
  • 357hg19
  • 106GRCh38
  • 2hg18
Encyclopedia version
  • 1Adipocyte.narrowpeak.bed.gz Adipocyte.consensus_summit_features.bed.gz
biosample_term_name!
  • fibroblast
BIOSAMPLE
TYPE

486 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
differential activity
gene expression
chromatin state
binding sites
histone modifications
eQTL
variant allelic effects
Fine-mapped variants
caQTL
pQTL
sQTL
primary cell
pericyte cell110101
osteoblast2252132
fibroblast of lung6442
foreskin fibroblast621142
fibroblast of cardiac tissue3423
tissue
adipose tissue78236141
omental fat pad5422223
subcutaneous adipose tissue2251613
subcutaneous abdominal adipose tissue51
cartilage tissue122
in vitro differentiated cells
adipocyte4741611
mesenchymal stem cell341211
chondrocyte5
Adipose SGBS cell line (adipocyte)1
Human Mesenchymal Cell derived Adipocytes1
cell line
GM23248211111
fibroblast of cardiac tissue212
HT1080211
foreskin fibroblast111
adipose tissue derived mesenchymal stem cell11
stem cell
mesenchymal stem cell1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego