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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1709candidate regulatory elements
  • 1218target gene predictions
  • 977histone modifications
  • 944chromatin state
  • 912accessible chromatin
  • 817binding sites
  • 689gene expression
  • 189eQTL
  • 172differential activity
  • 141variant allelic effects
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2590February, 2021
  • 2511September, 2022
  • 378February, 2024
  • 333November, 2021
  • 288June, 2020
  • 286September, 2023
  • 250May, 2021
  • 155May, 2020
  • 128August, 2021
  • 128March, 2020
  • 106January, 2022
  • 101October, 2022
  • 89January, 2020
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 38March, 2025
  • 35August, 2017
  • 32February, 2023
  • 30March, 2024
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 5944bed bed3+
  • 3576tsv
  • 869bed bed9
  • 546bigWig
  • 108txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 10480Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1847ChIP-Atlas
  • 966ENCODE
  • 534AMP
  • 507DGA
  • 421T1D
  • 406T2DKP
  • 281KPMP
  • 219BLUEPRINT
  • 1744DN
  • 151 T2DKP
  • 151GTEx
  • 111T2D
  • 101eQTLCatalogue
  • 100CMDGA
  • 67HPAP
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5294tissue
  • 2471primary cell
  • 2304cell line
  • 453in vitro differentiated cells
  • 4stem cell
Organ
  • 2910vasculature
  • 2855bodily fluid
  • 2845blood vessel
  • 2844blood
  • 2657vein
  • 947epithelium
  • 651kidney
  • 467connective tissue
  • 456brain
  • 374musculature of body
  • 307lung
  • 283intestine
  • 270pancreas
  • 254heart
  • 241limb
  • 210embryo
  • 199skin of body
  • 169large intestine
  • 160liver
  • 143extraembryonic component
  • 117stomach
  • 109eye
  • 96adipose tissue
  • 89bone element
  • 85mammary gland
  • 83small intestine
  • 81uterus
  • 77artery
  • 76prostate gland
  • 72placenta
  • 71adrenal gland
  • 64ureter
  • 63penis
  • 61lymph node
  • 49gonad
  • 48thymus
  • 45esophagus
  • 42spinal cord
  • 33spleen
  • 26testis
  • 25nerve
  • 24lymphatic vessel
  • 24lymphoid tissue
  • 22ovary
  • 22thyroid gland
  • 19mouth
  • 18skeleton
  • 16bronchus
  • 13bone marrow
  • 12breast
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 3pituitary gland
  • 1pericardium
Project
  • 9817AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 6862hg19
  • 1909GRCh38
  • 4hg18
biosample_term_name!
  • glomerular epithelium
lab.title!
  • Jesse Engreitz, Stanford University
BIOSAMPLE
TYPE

10528 results

search-icontable-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
gene expression
binding sites
histone modifications
caQTL
eQTL
variant allelic effects
tissue
whole blood26351
heart3720121513
stomach4019119311
kidney291421610171
brain29163182112
primary cell
monocyte286181154
common myeloid progenitor, CD34-positive271313
CD8-positive, alpha-beta T cell7330143
B cell179862
endothelial cell37115291
cell line
HeLa-S355431
A549211811812
H1-hESC13811128
K5627221712
MCF-7952513
in vitro differentiated cells
neural progenitor cell55154107
hematopoietic multipotent progenitor cell1910110111
adipocyte4216411
embryonic stem cell11561
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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