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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 3018target gene predictions
  • 2638pQTL
  • 1709candidate regulatory elements
  • 1223accessible chromatin
  • 977histone modifications
  • 913chromatin state
  • 817binding sites
  • 673gene expression
  • 484differential activity
  • 166eQTL
  • 141variant allelic effects
  • 74Fine-mapped variants
  • 8caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 2590February, 2021
  • 2511September, 2022
  • 1984July, 2026
  • 389May, 2021
  • 344February, 2024
  • 332November, 2021
  • 320May, 2026
  • 289June, 2020
  • 286September, 2023
  • 155May, 2020
  • 128August, 2021
  • 128March, 2020
  • 106January, 2022
  • 96October, 2022
  • 89January, 2020
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 32February, 2023
  • 30March, 2024
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 4August, 2017
  • 4March, 2026
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 8014bed bed3+
  • 3530tsv
  • 869bed bed9
  • 545bigWig
  • 112txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 12816Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1848ChIP-Atlas
  • 1458ENCODE-rE2G
  • 966ENCODE
  • 612DGA
  • 533AMP
  • 421T1D
  • 404T2DKP
  • 393HDMA
  • 320pyxis
  • 281KPMP
  • 219BLUEPRINT
  • 1744DN
  • 151GTEx
  • 141 T2DKP
  • 133CATlas
  • 111T2D
  • 101eQTLCatalogue
  • 100CMDGA
  • 67HPAP
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5936tissue
  • 3859primary cell
  • 2554cell line
  • 510in vitro differentiated cells
  • 3stem cell
Organ
  • 3363blood
  • 2901vasculature
  • 2860blood vessel
  • 2851bodily fluid
  • 2658vein
  • 942epithelium
  • 897brain
  • 756kidney
  • 504connective tissue
  • 488heart
  • 439lung
  • 357musculature of body
  • 354intestine
  • 318pancreas
  • 295skin of body
  • 244limb
  • 238liver
  • 223large intestine
  • 214embryo
  • 174extraembryonic component
  • 161eye
  • 141adipose tissue
  • 139stomach
  • 111muscle organ
  • 104bone element
  • 103mammary gland
  • 102adrenal gland
  • 97placenta
  • 96small intestine
  • 93thymus
  • 93uterus
  • 88artery
  • 87prostate gland
  • 73ureter
  • 64gonad
  • 64penis
  • 63spleen
  • 62lymph node
  • 60__MARKER__
  • 49spinal cord
  • 48esophagus
  • 47thyroid gland
  • 32ovary
  • 31testis
  • 25nerve
  • 24lymphoid tissue
  • 22skeleton
  • 21lymphatic vessel
  • 21mouth
  • 16bronchus
  • 15breast
  • 13bone marrow
  • 13pituitary gland
  • 13urinary bladder
  • 12tongue
  • 12vagina
  • 5trachea
  • 4nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 12150AMP
  • 332ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 17community
  • 5ITG
Genome assembly (visualization)
  • 6936hg19
  • 3892GRCh38
  • 4hg18
biosample_term_name!
  • hepatoblast
lab.title!
  • Stephen Parker, UMich
BIOSAMPLE
TYPE

12864 results

search-icontable-tab-icon
Clear Filters
gene expression
target gene predictions
candidate regulatory elements
chromatin state
differential activity
accessible chromatin
variant allelic effects
binding sites
histone modifications
eQTL
tissue
whole blood26351
heart38375121141
stomach4240311911
kidney282910216171
brain30292318112
primary cell
monocyte2188611544
fibroblast283401102
endothelial cell1732212825
CD8-positive, alpha-beta T cell27743013
T-cell644
cell line
A549332111182
HeLa-S359531
H1-hESC39111128
K5623071162
MCF-71391253
in vitro differentiated cells
hematopoietic multipotent progenitor cell2219111011
neural progenitor cell65101547
adipocyte7441211
embryonic stem cell16151
mesenchymal stem cell431121
stem cell
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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