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Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1110
target gene predictions
807
accessible chromatin
468
differential activity
465
gene expression
364
candidate regulatory elements
206
histone modifications
196
chromatin state
99
binding sites
79
variant allelic effects
55
eQTL
23
caQTL
5
hQTL
5
sQTL
3
meQTL
1
other
Date released
1060
July, 2026
484
September, 2022
451
February, 2021
331
November, 2021
316
May, 2026
281
September, 2023
255
May, 2021
141
February, 2024
85
May, 2020
56
January, 2021
55
March, 2023
52
June, 2020
40
May, 2022
39
August, 2021
39
May, 2024
37
January, 2022
33
July, 2025
31
October, 2022
22
January, 2020
19
April, 2020
16
February, 2020
9
August, 2018
9
November, 2022
7
October, 2019
6
August, 2017
4
February, 2023
3
November, 2020
2
January, 2025
1
June, 2021
1
March, 2020
1
March, 2024
Available data
2709
bed bed3+
603
tsv
398
bigWig
163
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
12
bed bed3
12
bed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
2
csv
Organism
3841
Homo sapiens
Collection Tags
542
ENCODE-rE2G
477
EpiMap
385
HDMA
358
AMP
355
DGA
353
T2DKP
330
T1D
316
pyxis
281
KPMP
213
ChIP-Atlas
211
BLUEPRINT
208
ENCODE
133
CATlas
79
T2DKP
55
HPAP
45
T2D
35
eQTLCatalogue
26
FNIH_projects-heart
15
CMDGA
12
ROADMAP
11
FNIH_projects-liver
6
4DN
1
GTEx
Biosample type
5951
tissue
3886
primary cell
2559
cell line
509
in vitro differentiated cells
4
stem cell
Organ
789
epithelium
466
blood
338
connective tissue
335
kidney
231
brain
205
heart
171
skin of body
169
vasculature
150
pancreas
123
blood vessel
88
liver
78
lung
68
eye
62
musculature of body
60
__MARKER__
52
adipose tissue
50
mammary gland
46
muscle organ
43
extraembryonic component
41
penis
37
artery
36
thymus
25
adrenal gland
24
spleen
23
intestine
23
thyroid gland
22
embryo
20
vein
18
bone element
17
lymphatic vessel
16
bronchus
13
bone marrow
11
esophagus
11
placenta
11
prostate gland
11
stomach
9
bodily fluid
6
large intestine
5
skeleton
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
2
ovary
1
limb
1
pericardium
1
testis
Project
3192
AMP
331
ENCODE
281
KPMP
59
T1D
19
LungMap
4
community
Genome assembly (visualization)
1820
hg19
1799
GRCh38
Encyclopedia version
1
Adipocyte.narrowpeak.bed.gz Adipocyte.consensus_summit_features.bed.gz
1
Endothelial.narrowpeak.bed.gz Endothelial.consensus_summit_features.bed.gz
1
FAP.narrowpeak.bed.gz Mesenchymal_Stem_Cell.consensus_summit_features.bed.gz
1
Macrophage.narrowpeak.bed.gz Macrophage.consensus_summit_features.bed.gz
1
Neuromuscular_junction.narrowpeak.bed.gz Neuromuscular_junction.consensus_summit_features.bed.gz
1
Neuronal.narrowpeak.bed.gz Neuronal.consensus_summit_features.bed.gz
1
Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
1
Smooth_Muscle.narrowpeak.bed.gz Smooth_Muscle.consensus_summit_features.bed.gz
1
T_cell.narrowpeak.bed.gz T_cell.consensus_summit_features.bed.gz
1
Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
1
Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
1
Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
biosample_term_name!
hepatocyte
BIOSAMPLE
TYPE
3886 results
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target gene predictions
accessible chromatin
differential activity
gene expression
candidate regulatory elements
histone modifications
chromatin state
binding sites
variant allelic effects
eQTL
caQTL
hQTL
sQTL
meQTL
other
primary cell
monocyte
2
18
4
15
86
1
4
2
1
1
fibroblast
28
40
10
3
1
6
2
endothelial cell
17
24
25
9
3
1
2
2
2
3
CD8-positive, alpha-beta T cell
27
4
3
7
30
1
macrophage
13
22
17
2
3
3
8
2
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