Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 109target gene predictions
  • 94histone modifications
  • 79candidate regulatory elements
  • 69accessible chromatin
  • 65gene expression
  • 44chromatin state
  • 38binding sites
  • 6variant allelic effects
  • 1representative DNase hypersensitivity sites
Date released
  • 180February, 2021
  • 105September, 2022
  • 44July, 2026
  • 39May, 2021
  • 32February, 2024
  • 31August, 2021
  • 21June, 2020
  • 18November, 2022
  • 10March, 2020
  • 7May, 2020
  • 4August, 2017
  • 4September, 2023
  • 3January, 2020
  • 3January, 2022
  • 2November, 2019
  • 2October, 2019
Available data
  • 391bed bed3+
  • 66tsv
  • 40bed bed9
  • 24csv
  • 12bigWig
  • 5bigBed bed9
Organism
  • 505Homo sapiens
Collection Tags
  • 139ChIP-Atlas
  • 105EpiMap
  • 88AMP
  • 48DGA
  • 47ENCODE
  • 44ENCODE-rE2G
  • 23CMDGA
  • 7 T2DKP
  • 4T2DKP
Biosample type
  • 5951tissue
  • 3933primary cell
  • 2551cell line
  • 505in vitro differentiated cells
  • 4stem cell
Organ
  • 52connective tissue
  • 30embryo
  • 26epithelium
  • 14blood
  • 12brain
  • 9skin of body
  • 8liver
  • 6eye
  • 6heart
  • 6pancreas
  • 6penis
  • 5extraembryonic component
  • 4nose
  • 3mammary gland
  • 2adipose tissue
  • 2bone element
  • 2kidney
  • 2lymphatic vessel
  • 2muscle organ
  • 2musculature of body
  • 2vasculature
  • 1blood vessel
Project
  • 505AMP
Genome assembly (visualization)
  • 387hg19
  • 109GRCh38
biosample_term_name!
  • induced pluripotent stem cell
BIOSAMPLE
TYPE

505 results

search-icontable-tab-icon
Clear Filters
target gene predictions
histone modifications
candidate regulatory elements
accessible chromatin
gene expression
chromatin state
binding sites
variant allelic effects
representative DNase hypersensitivity sites
in vitro differentiated cells
hematopoietic multipotent progenitor cell2211911101
neural progenitor cell61551074
adipocyte7144161
embryonic stem cell11651
mesenchymal stem cell413121
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego