Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2636pQTL
  • 57target gene predictions
  • 47candidate regulatory elements
  • 46binding sites
  • 27chromatin state
  • 25histone modifications
  • 12accessible chromatin
  • 2eQTL
  • 1gene expression
Date released
  • 2635February, 2025
  • 75September, 2022
  • 74February, 2021
  • 28February, 2024
  • 19October, 2022
  • 12June, 2020
  • 4May, 2021
  • 3August, 2021
  • 2August, 2017
  • 1March, 2024
Available data
  • 2636tsv
  • 192bed bed3+
  • 25bed bed9
Organism
  • 2853Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 75EpiMap
  • 64ChIP-Atlas
  • 41ENCODE
  • 284DN
  • 4DGA
  • 3AMP
  • 3T2DKP
  • 1GTEx
Biosample type
  • 2639tissue
  • 205cell line
  • 9primary cell
Organ
  • 2903vasculature
  • 2853bodily fluid
  • 2842blood
  • 2838blood vessel
  • 2658vein
  • 960epithelium
  • 652kidney
  • 470connective tissue
  • 467brain
  • 386musculature of body
  • 311lung
  • 288intestine
  • 277pancreas
  • 259heart
  • 244limb
  • 215embryo
  • 204skin of body
  • 174large intestine
  • 157liver
  • 146extraembryonic component
  • 119stomach
  • 109eye
  • 89bone element
  • 87adipose tissue
  • 87mammary gland
  • 84small intestine
  • 83uterus
  • 78prostate gland
  • 75artery
  • 73adrenal gland
  • 73placenta
  • 64penis
  • 64ureter
  • 62lymph node
  • 50gonad
  • 49thymus
  • 45esophagus
  • 43spinal cord
  • 34spleen
  • 26testis
  • 25nerve
  • 24lymphatic vessel
  • 24lymphoid tissue
  • 23ovary
  • 23thyroid gland
  • 19mouth
  • 18skeleton
  • 16bronchus
  • 13bone marrow
  • 13breast
  • 13pituitary gland
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 2853AMP
Genome assembly (visualization)
  • 217hg19
  • 53GRCh38
biosample_term_name!
  • intestinal epithelial cell
BIOSAMPLE
TYPE

2853 results

search-icontable-tab-icon
Clear Filters
pQTL
target gene predictions
candidate regulatory elements
binding sites
chromatin state
histone modifications
accessible chromatin
eQTL
gene expression
tissue
whole blood26351
blood2
cerebrospinal fluid1
cell line
K5622372711
GM12878822211
GM06990122111
GM19240212111
HAP-1221111
HL-60122111
NAMALWA cell22121
OCI-LY7221111
CMK121111
GM1287512211
GM1923821211
GM1923921211
RPMI8226121111
GM1289111211
GM1289211211
KBM-712111
NB41211
DOHH2121
GM12873121
GM18505121
GM19099121
GM19193121
SU-DHL-6121
GM1084721
GM1287221
GM1852621
GM1895121
NAMALWA2
SUDHL611
GM128741
Karpas-4221
primary cell
peripheral blood mononuclear cell411
peripheral blood stem cell111
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego