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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1356target gene predictions
  • 976histone modifications
  • 941chromatin state
  • 906accessible chromatin
  • 871candidate regulatory elements
  • 815binding sites
  • 678gene expression
  • 176eQTL
  • 172differential activity
  • 140variant allelic effects
  • 82Fine-mapped variants
  • 13caQTL
  • 5hQTL
  • 5sQTL
  • 3meQTL
  • 3other
  • 2variant to gene
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2510September, 2022
  • 1744February, 2021
  • 386May, 2021
  • 376February, 2024
  • 332November, 2021
  • 288June, 2020
  • 286September, 2023
  • 152May, 2020
  • 125March, 2020
  • 120August, 2021
  • 103January, 2022
  • 101October, 2022
  • 88January, 2020
  • 64February, 2020
  • 64March, 2023
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 38March, 2025
  • 33August, 2017
  • 32February, 2023
  • 30March, 2024
  • 19April, 2020
  • 14October, 2019
  • 13November, 2019
  • 9August, 2018
  • 9May, 2019
  • 7April, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1January, 2018
  • 1July, 2020
  • 1June, 2021
Available data
  • 5218bed bed3+
  • 3565tsv
  • 869bed bed9
  • 541bigWig
  • 108txt
  • 39bigBed bed9
  • 34bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 9737Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1845ChIP-Atlas
  • 641DGA
  • 521AMP
  • 409T1D
  • 396T2DKP
  • 281KPMP
  • 219BLUEPRINT
  • 1744DN
  • 161 T2DKP
  • 151GTEx
  • 128ENCODE
  • 108T2D
  • 98eQTLCatalogue
  • 94CMDGA
  • 67HPAP
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 4801tissue
  • 2348primary cell
  • 2204cell line
  • 426in vitro differentiated cells
  • 4stem cell
Organ
  • 2887vasculature
  • 2837bodily fluid
  • 2828blood
  • 2828blood vessel
  • 2654vein
  • 906epithelium
  • 568kidney
  • 440connective tissue
  • 416brain
  • 302musculature of body
  • 250lung
  • 231intestine
  • 223heart
  • 221pancreas
  • 196limb
  • 185embryo
  • 163skin of body
  • 154liver
  • 138large intestine
  • 120extraembryonic component
  • 100eye
  • 91stomach
  • 88adipose tissue
  • 78bone element
  • 78uterus
  • 75artery
  • 73mammary gland
  • 66small intestine
  • 64prostate gland
  • 60placenta
  • 59adrenal gland
  • 49lymph node
  • 46penis
  • 46ureter
  • 41gonad
  • 40thymus
  • 35esophagus
  • 35spinal cord
  • 25spleen
  • 22lymphatic vessel
  • 22nerve
  • 21testis
  • 20lymphoid tissue
  • 19ovary
  • 19thyroid gland
  • 17skeleton
  • 15mouth
  • 14bronchus
  • 13pituitary gland
  • 12bone marrow
  • 10breast
  • 9urinary bladder
  • 8tongue
  • 8vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 9075AMP
  • 332ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 6139hg19
  • 1901GRCh38
  • 4hg18
biosample_term_name!
  • islet of Langerhans
software_used.software.name!
  • encode-ccres
BIOSAMPLE
TYPE

9785 results

search-icontable-tab-icon
Clear Filters
pQTL
target gene predictions
histone modifications
chromatin state
accessible chromatin
candidate regulatory elements
binding sites
gene expression
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
hQTL
sQTL
meQTL
other
variant to gene
representative DNase hypersensitivity sites
tissue
whole blood26351
heart20121519132
kidney1421610141711
stomach2111931911
brain163182161121
primary cell
monocyte286181154211
CD8-positive, alpha-beta T cell530143
endothelial cell7115329122
common myeloid progenitor, CD34-positive141313
B cell1086112
cell line
HeLa-S355331
A549191181182
H1-hESC39111128
K5622317162
EndoC_BH11181831
in vitro differentiated cells
neural progenitor cell51541047
hematopoietic multipotent progenitor cell1011011011
adipocyte6164211
embryonic stem cell11561
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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