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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 3018target gene predictions
  • 2638pQTL
  • 1709candidate regulatory elements
  • 1236accessible chromatin
  • 977histone modifications
  • 944chromatin state
  • 817binding sites
  • 680gene expression
  • 482differential activity
  • 180eQTL
  • 141variant allelic effects
  • 74Fine-mapped variants
  • 25caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 2585February, 2021
  • 2511September, 2022
  • 1984July, 2026
  • 389May, 2021
  • 373February, 2024
  • 333November, 2021
  • 318May, 2026
  • 289June, 2020
  • 286September, 2023
  • 155May, 2020
  • 128August, 2021
  • 128March, 2020
  • 106January, 2022
  • 101October, 2022
  • 89January, 2020
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 35August, 2017
  • 32February, 2023
  • 30March, 2024
  • 21July, 2025
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 4March, 2026
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 8068bed bed3+
  • 3546tsv
  • 869bed bed9
  • 546bigWig
  • 107txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • 12bed bed3
  • bed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 12896Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1848ChIP-Atlas
  • 1458ENCODE-rE2G
  • 966ENCODE
  • 641DGA
  • 534AMP
  • 421T1D
  • 406T2DKP
  • 393HDMA
  • 318pyxis
  • 281KPMP
  • 219BLUEPRINT
  • 174 T2DKP
  • 1744DN
  • 151GTEx
  • 133CATlas
  • 111T2D
  • 101eQTLCatalogue
  • 100CMDGA
  • 67HPAP
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5951tissue
  • 3914primary cell
  • 2559cell line
  • 514in vitro differentiated cells
  • 4stem cell
Organ
  • 3365blood
  • 2902vasculature
  • 2861blood vessel
  • 2853bodily fluid
  • 2659vein
  • 946epithelium
  • 903brain
  • 749kidney
  • 517connective tissue
  • 488heart
  • 440lung
  • 382musculature of body
  • 358intestine
  • 319pancreas
  • 296skin of body
  • 244limb
  • 240liver
  • 226large intestine
  • 215embryo
  • 174extraembryonic component
  • 161eye
  • 142adipose tissue
  • 140stomach
  • 111muscle organ
  • 106bone element
  • 104mammary gland
  • 102adrenal gland
  • 97placenta
  • 97small intestine
  • 93thymus
  • 93uterus
  • 88artery
  • 87prostate gland
  • 73ureter
  • 64gonad
  • 64penis
  • 63spleen
  • 62lymph node
  • 60__MARKER__
  • 49spinal cord
  • 48esophagus
  • 47thyroid gland
  • 32ovary
  • 31testis
  • 25nerve
  • 24lymphoid tissue
  • 24skeleton
  • 21lymphatic vessel
  • 21mouth
  • 16bronchus
  • 15breast
  • 13bone marrow
  • 13pituitary gland
  • 13urinary bladder
  • 12tongue
  • 12vagina
  • 5trachea
  • 4nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 12229AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 17community
  • 5ITG
Genome assembly (visualization)
  • 7002hg19
  • 3893GRCh38
  • 4hg18
biosample_term_name!
  • kidney loop of Henle thick ascending limb epithelial cell
files.file_type!
  • bed narrowPeak
BIOSAMPLE
TYPE

12944 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
accessible chromatin
tissue
whole blood2635
heart38375121
stomach42403119
kidney282910216
brain30292318
primary cell
monocyte21886
fibroblast28340
endothelial cell173231
CD8-positive, alpha-beta T cell2774301
macrophage13321
cell line
A54933211118
HeLa-S35953
H1-hESC391111
K562307117
MCF-7139125
in vitro differentiated cells
hematopoietic multipotent progenitor cell22191110
neural progenitor cell6510154
adipocyte74416
embryonic stem cell1615
mesenchymal stem cell43112
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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