Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 38target gene predictions
  • 34accessible chromatin
  • 33differential activity
  • 23gene expression
  • 22candidate regulatory elements
  • 12binding sites
  • 12histone modifications
  • 8chromatin state
  • 4variant allelic effects
  • 3Fine-mapped variants
  • 1eQTL
Date released
  • 41July, 2026
  • 30May, 2026
  • 28February, 2024
  • 25September, 2022
  • 17February, 2021
  • 12May, 2024
  • 8March, 2020
  • 5November, 2021
  • 4August, 2021
  • 4June, 2020
  • 4March, 2023
  • 3January, 2020
  • 3May, 2020
  • 2May, 2021
  • 1August, 2017
  • 1February, 2020
  • 1July, 2020
  • 1October, 2022
Available data
  • 122bed bed3+
  • 26tsv
  • 21bigWig
  • 7bed bed9
  • 3csv
Organism
  • 190Homo sapiens
Collection Tags
  • 42DGA
  • 30pyxis
  • 28HDMA
  • 26AMP
  • 21EpiMap
  • 13ChIP-Atlas
  • 13ENCODE-rE2G
  • 12FNIH_projects-liver
  • 11 T2DKP
  • 10T2DKP
  • 5GTEx
  • 4ENCODE
  • 4HPAP
Biosample type
  • 135primary cell
  • 32cell line
  • 15tissue
  • 8in vitro differentiated cells
Organ
  • 3365blood
  • 2902vasculature
  • 2861blood vessel
  • 2853bodily fluid
  • 2659vein
  • 952epithelium
  • 903brain
  • 756kidney
  • 518connective tissue
  • 488heart
  • 440lung
  • 386musculature of body
  • 358intestine
  • 319pancreas
  • 296skin of body
  • 244limb
  • 226large intestine
  • 215embryo
  • 190liver
  • 174extraembryonic component
  • 161eye
  • 142adipose tissue
  • 140stomach
  • 111muscle organ
  • 106bone element
  • 104mammary gland
  • 102adrenal gland
  • 97placenta
  • 97small intestine
  • 93thymus
  • 93uterus
  • 88artery
  • 87prostate gland
  • 73ureter
  • 64gonad
  • 64penis
  • 63spleen
  • 62lymph node
  • 60__MARKER__
  • 49spinal cord
  • 48esophagus
  • 47thyroid gland
  • 32ovary
  • 31testis
  • 25nerve
  • 24lymphoid tissue
  • 24skeleton
  • 21lymphatic vessel
  • 21mouth
  • 16bronchus
  • 15breast
  • 13bone marrow
  • 13pituitary gland
  • 13urinary bladder
  • 12tongue
  • 12vagina
  • 5trachea
  • 4nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 185AMP
  • 5ENCODE
Genome assembly (visualization)
  • 103GRCh38
  • 91hg19
  • 1hg18
biosample_term_name!
  • liver
BIOSAMPLE
TYPE

190 results

search-icontable-tab-icon
Clear Filters
target gene predictions
accessible chromatin
differential activity
gene expression
candidate regulatory elements
binding sites
histone modifications
chromatin state
variant allelic effects
Fine-mapped variants
eQTL
primary cell
hepatocyte81241321412
hepatic stellate cell34412111
endothelial cell of hepatic sinusoid646
endothelial cell1141
cholangiocyte114
cell line
HepG2522352
HuH-7211111
HuH-7.5211
hepatic stellate cell11
tissue
right lobe of liver612131
left lobe of liver1
in vitro differentiated cells
hepatocyte221
hepatocyte(AFP)3
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego